BQ622993

Overview
NameBQ622993
Unique NameBQ622993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11263 contig Csv1_Contig11263:88..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.331e-38
Identity = 93/213 (43.66%), Postives = 131/213 (61.50%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEA----IKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGV-----WEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGA 609
            +PV+G GT      E V K   +EA    I++G+RH D+A  Y  E  +G+AI   +  G +  R+D+F T+KLW N    +LV PAL+KSL+ LQ+DYVDLY+IH P+S KP  K    +PK++   L +  V     WEA+E+C+  GLTK IGVSNF+ K++E +L    +   P  NQVE +P   Q +L EFCKS  I++ A++ LGA
Sbjct:   16 IPVLGFGTYAP---EEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVK-REDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNK---FVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGA 221          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 2.331e-38
Identity = 93/213 (43.66%), Postives = 131/213 (61.50%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEA----IKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGV-----WEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGA 609
            +PV+G GT      E V K   +EA    I++G+RH D+A  Y  E  +G+AI   +  G +  R+D+F T+KLW N    +LV PAL+KSL+ LQ+DYVDLY+IH P+S KP  K    +PK++   L +  V     WEA+E+C+  GLTK IGVSNF+ K++E +L    +   P  NQVE +P   Q +L EFCKS  I++ A++ LGA
Sbjct:   16 IPVLGFGTYAP---EEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVK-REDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNK---FVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGA 221          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.976e-38
Identity = 88/211 (41.71%), Postives = 125/211 (59.24%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLD--YKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGT 630
            MP +GLGT   K     +K AV+ A+  GYRH D A+ Y  ER +GEA+ E L  G    R D+F+T+KLW    H D V  A ++SL  L++ Y+DLYLIHWP++    ++L    P   +   D  Y+  W AME+    GL K IG+SNF++K+I+ +L+ +   P VNQVE +P   Q +L   C S+++ VTA+SPLG+    W T
Sbjct:   13 MPTVGLGTW--KSAPGQVKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMAFGRGDELIPRHPDGTIQYDDTHYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDILSIAKHKPVVNQVECHPYLVQAELVSHCWSRNLTVTAYSPLGSPDRPWVT 221          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 5.193e-38
Identity = 92/212 (43.40%), Postives = 124/212 (58.49%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVP--LDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSW 624
            +MP +GLGT   K     +  AV  AI LGYRH D A  Y  E+ +G A+ E LK  ++  RQDLFI +KLW     + +V  A +K+L  LQ+DY+DLYLIHWP   KP      L    +++P   D+   W AME+    GL K IGVSNF+  +IE +L    +   P+VNQ+E +P   Q +L E+C SK I+VTA+SPLG+    W
Sbjct:   12 KMPTLGLGTW--KSPPGQVTEAVKVAIDLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVK-RQDLFIVSKLWCTFHDKSMVKGAFQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKTIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHSKGIVVTAYSPLGSPDRPW 220          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 8.859e-38
Identity = 84/212 (39.62%), Postives = 132/212 (62.26%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKED----LVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSW 624
            +MP++GLGT   K +  ++K AV+ A++ GYRH D A  Y  E  +GEA  E +       R+D+F+T+KLW    H D V P+L K+L+ L+++Y+DLYLIHWP + +  +       KED       +DYK  W AME+    GL + IG+SNF+S++I+ +L+ ++I P+V QVE +P   Q +L   C+ + +++TA+SPLG+   +W
Sbjct:   12 KMPLLGLGTW--KSEPGLVKQAVIWALESGYRHIDCAPIYANEPEIGEAFQETMGPDKGIRREDVFVTSKLWNTKHHPDDVEPSLLKTLKDLKLEYLDLYLIHWPYAFQRGD--TPFPRKEDGTLLYDDIDYKLTWAAMEKLVGKGLVRAIGLSNFNSRQIDDILSVASIKPTVLQVESHPYLAQVELLSHCRDRGLVMTAYSPLGSPDRAW 219          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.511e-37
Identity = 89/209 (42.58%), Postives = 126/209 (60.29%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEK--LQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSS 621
            E+P +GLGT    +DE V++ A+  A+ LGYRH DTA  YG E+ +G  + +    G++  R+DLFIT+KLW  +         L++SL  LQMDYVDLYLIHWP++  P+    ++S   K ++   D  GVW+ ME    LGL K IG+SNF     E +L    I P+  Q+E++P   Q++L EF KSK I V ++S LG+A  S
Sbjct:   13 EIPTVGLGTW-GMEDEAVLEGAIRNALSLGYRHIDTAFIYGNEKMIGNILKKLFDEGVVQ-RKDLFITSKLW--NTFHGCPEDGLRRSLNDLQMDYVDLYLIHWPVTFDPAPDGTVESCGKKYNVGKFDAVGVWKKMEALVDLGLAKSIGISNFGKANTEKILGTCRICPAAIQIELHPYLNQKELVEFMKSKGIQVISYSSLGSAPGS 217          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.577e-37
Identity = 90/212 (42.45%), Postives = 129/212 (60.85%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKL----GYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKED-----LVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +PV+G GT      E V K   +E  KL    G+RH D+A  Y  E+ +G+AI   ++ G +  R+D+F T+KLWL     +LV PAL+KSL  LQ+DYVDLY+IH+PI+ KP E+   L P+++        +D    WEAME+C+  GL K IGVSNF+ +++E +L    +   P  NQVE +P   Q +L +FCKSK I++ A+  LG
Sbjct:   16 IPVLGFGTYAP---EEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVK-REDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFPIALKPGEE---LFPEDEHGKLIFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAYGALG 220          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.396e-37
Identity = 83/210 (39.52%), Postives = 132/210 (62.86%), Query Frame = 1
Query:   10 VIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKED--LVPLD---YKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSW 624
            +IGLGT   K +   +K A+  A+ +GYRH D A+ YG E  +GEA+ E +  G    R++LF+T+KLW    H + V  AL+K+L  LQ++Y+DLYL+HWP +    E+  +  PK D   +  D   YK  W+A+E     GL K +G+SNF+S++I+ +L+ +++ P+V QVE +P   Q +L   C+++ + VTA+SPLG++  +W
Sbjct:    1 LIGLGTW--KSNPGQVKAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLADLQLEYLDLYLMHWPYA---FERGDNPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVKALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAW 205          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: ALDR_RAT (Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 5.742e-37
Identity = 90/212 (42.45%), Postives = 123/212 (58.02%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVP--LDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSW 624
            +MP +GLGT   K     +  AV  AI +GYRH D A  Y  E+ +G A+ E LK  ++  RQDLFI +KLW     + +V  A +K+L  LQ+DY+DLYLIHWP   KP      L    +++P   D+   W AME+    GL K IGVSNF+  +IE +L    +   P+VNQ+E +P   Q +L E+C  K I+VTA+SPLG+    W
Sbjct:   12 KMPTLGLGTW--KSPPGQVTEAVKVAIDMGYRHIDCAQVYQNEKEVGVALQEKLKEQVVK-RQDLFIVSKLWCTFHDQSMVKGACQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDTDFVDTWTAMEQLVDEGLVKAIGVSNFNPLQIERILNKPGLKYKPAVNQIECHPYLTQEKLIEYCHCKGIVVTAYSPLGSPDRPW 220          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: ALDR_BOVIN (Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.499e-37
Identity = 89/212 (41.98%), Postives = 125/212 (58.96%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVP--LDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTI--PPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSW 624
            +MP++GLGT   K     +  AV  AI LGYRH D A  Y  E  +G A+   L+  ++  R+DLFI +KLW     +DLV  A +K+L  L++DY+DLYLIHWP   KP +    L    +++P   D+   W AMEE    GL K IGVSNF+  ++E +L    +   P+VNQ+E +P   Q +L ++C SK I+VTA+SPLG+    W
Sbjct:   11 KMPILGLGTW--KSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLALQAKLQEQVVK-REDLFIVSKLWCTYHDKDLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKDFFPLDEDGNVIPSEKDFVDTWTAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIECHPYLTQEKLIQYCNSKGIVVTAYSPLGSPDRPW 219          
The following BLAST results are available for this feature:
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
PGFS2_BOVIN2.331e-3843.66Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN2.331e-3843.66Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
A1A1A_DANRE3.976e-3841.71Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
ALDR_MOUSE5.193e-3843.40Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
A1A1B_DANRE8.859e-3839.62Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
ALDR_ENCCU1.511e-3742.58Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]
AK1CO_HORSE2.577e-3742.45Aldo-keto reductase family 1 member C23-like prote... [more]
AK1A1_CRIGR4.396e-3739.52Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]
ALDR_RAT5.742e-3742.45Aldose reductase OS=Rattus norvegicus GN=Akr1b1 PE... [more]
ALDR_BOVIN7.499e-3741.98Aldose reductase OS=Bos taurus GN=AKR1B1 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00084 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00084 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622993 ID=BQ622993; Name=BQ622993; organism=Citrus sinensis; type=EST; length=638bp
GAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAAGAAGGATGAAAA
TGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCGGTTACAGACACT
TTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTTGGAGAAGCAATC
GATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCAAGACCTCTTCAT
TACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACCTCGTTGTCCCAG
CTTTGAAGAAGTCTCTTAGGACCCTTCAGATGGACTATGTTGACCTCTAT
CTCATTCACTGGCCCATCAGTGCAAAGCCAAGTGAGAAATTACAAAGCCT
TATACCCAAAGAAGATCTTGTACCATTGGACTACAAGGGTGTGTGGGAAG
CCATGGAAGAGTGCCAGAGGCTTGGCCTCACTAAGTTCATTGGTGTCAGC
AACTTCTCTTCCAAGAAGATTGAGGCTCTACTCGCCTTCTCTACCATCCC
TCCTTCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAGACAGC
TCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCTCTCCC
TTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGT
back to top