BQ622993

Overview
NameBQ622993
Unique NameBQ622993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11263 contig Csv1_Contig11263:88..725. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.978e-29
Identity = 84/217 (38.71%), Postives = 121/217 (55.76%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVP----------LDYKGV-----WEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            EMP IG G    K D++     V  AIK GYR FD A +YG E+ +GE +  A+  G++T R+++F+T+KLW N      V  AL K+L+ L++DYVDL+LIH+PI+ K        +P E+  P            Y+ V     W+A+E+  + G  + IGVSNF    +  L   +TI P+V QVE +P  QQ +L E+ +   I VTA+S  G
Sbjct:   16 EMPSIGFGCW--KLDKSTAADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIVT-REEIFLTSKLWNNYHDPKNVETALNKTLKDLKVDYVDLFLIHFPIAFK-------FVPIEEKYPPGFYCGDGDNFVYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITVTAYSSFG 222          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 1.978e-29
Identity = 78/197 (39.59%), Postives = 112/197 (56.85%), Query Frame = 1
Query:   19 LGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHR-DLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            LG  V K      + AV EA+++GYRH DTA+ YG E  +G AI  +   G+   R DLFITTKLW ND H  D    A+ +SL  L +D VDLYL+HWP  A  +                Y   WE M E +  GLT+ IGVSN     +E ++A + + P+VNQ+E++PA+QQR++ ++  +  + + ++ PLG
Sbjct:   17 LGYGVFKVPPADTQRAVEEALEVGYRHIDTAAIYGNEEGVGAAIAAS---GI--ARDDLFITTKLW-NDRHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADN----------------YVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREITDWAAAHDVKIESWGPLG 191          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 75/204 (36.76%), Postives = 112/204 (54.90%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAG 615
            MP +GLG      +E +   A+ +A+++GYR  DTA+ Y  E  +G+A+  A        R++LFITTKLW +D  R     AL++SL+ LQ+DY+DLYL+HWP+ A                   Y   W+ M   Q+ GL K IGV NF    ++ L+  + +PP +NQ+E++P  QQRQL  +  +  I   ++SPL   G
Sbjct:   15 MPQLGLGVWKASNEEVI--AAIHKALEVGYRSIDTATAYQNEEGVGKALKAAS-----VAREELFITTKLWNDDQKRPR--EALQESLKKLQLDYLDLYLMHWPVPAIDH----------------YVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVPPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGG 193          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29
Identity = 78/216 (36.11%), Postives = 121/216 (56.02%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIP--------------KEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +MP++GLG    K   +V    + EAIK+GYR FD A +Y  E+ +G+ ++ A+K GL+  R+DL + +KLW +  H D V  AL+++L  LQ+DYVD++ IH+P++ KP    +   P              +E+ VPL     W A+E+    G  K +G+SNFS   I+ LL  + I P   Q+E +P   Q +L ++ K+  I V A+S  G
Sbjct:   15 KMPLVGLGCW--KMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVK-REDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQVPL--LDTWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERLIKYVKNAGIQVVAYSSFG 225          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28
Identity = 81/217 (37.33%), Postives = 120/217 (55.30%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVP----------LDYKGV-----WEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            EMP +G G    K D+      +  AIK+GYR FD A +YG E+ +GE I+ AL  GL+  R +LF+ +KLW +      V  AL ++L  L++DY+DL+LIH+PI+ K        +P E+  P            Y+GV     W A+E+    G  + IG+SNF    I+ LL  + I P+V Q+E +P  QQ +L E+ +S+ I +TA+S  G
Sbjct:   10 EMPSVGFGCW--KVDKATCADTIYNAIKVGYRLFDGAEDYGNEKEVGEGINRALDEGLVA-RDELFVVSKLWNSFHDPKNVEKALDRTLSDLKVDYLDLFLIHFPIAFK-------FVPFEEKYPPGFYCGDGDKFIYEGVPIIDTWRALEKMVEKGKIRSIGISNFPGALIQDLLRGAKIKPAVLQIEHHPYLQQPRLIEYVQSQGIAITAYSSFG 216          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28
Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 1
Query:    1 EMPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            +MP  GLG       E V + AV  A+  GYRH DTA+ Y  E ++G  +  +        R+D+FITTKLW  +   +  + A ++S + L +DY+DLYLIHWP       + + ++ KE    LD    W A E+  +    + IGVSNF    +E +LA  T+ P VNQVE++P   Q  LR FC +K I V A+SPLG
Sbjct:   16 KMPQFGLGVWQSPAGE-VTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRASG-----VPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP-------RGKDILSKEGKKYLDS---WRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLRAFCDAKQIKVEAWSPLG 201          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGA_ECOLI (2,5-diketo-D-gluconic acid reductase A OS=Escherichia coli (strain K12) GN=dkgA PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.282e-28
Identity = 75/204 (36.76%), Postives = 110/204 (53.92%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAG 615
            MP +GLG      +E +   A+ +A+++GYR  DTA+ Y  E  +G+A+  A        R++LFITTKLW +D  R     AL  SL+ LQ+DY+DLYL+HWP+ A                   Y   W+ M E Q+ GL K IGV NF    ++ L+  + + P +NQ+E++P  QQRQL  +  +  I   ++SPL   G
Sbjct:   15 MPQLGLGVWQASNEEVIT--AIQKALEVGYRSIDTAAAYKNEEGVGKALKNAS-----VNREELFITTKLWNDDHKRPR--EALLDSLKKLQLDYIDLYLMHWPVPAIDH----------------YVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGG 193          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: Y2161_MYCVP (Uncharacterized oxidoreductase Mvan_2161 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_2161 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.675e-28
Identity = 77/201 (38.31%), Postives = 112/201 (55.72%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLG 606
            MPVIGLG  V +  +   + +V+ A++ GYR  DTA+ YG E A+G AI    K G+   R +LF+TTKL  +D        AL+ SL  L +DYVDLYLIHWP  ++ +                Y   W  + + + LGLT+ IGVSNF ++ ++ ++  S   P+VNQ+E++P   Q +LR       I+  A+SPLG
Sbjct:   18 MPVIGLG--VGELSDAEAEQSVLAALEAGYRLIDTAAAYGNEAAVGRAI---AKSGV--PRGELFVTTKLATDDLGFQSSQDALRASLERLGLDYVDLYLIHWPAGSQGT----------------YVDSWGGLMKLKELGLTRSIGVSNFHAQHLDDIIGLSFFTPAVNQIELHPLLNQAELRAVNAEHGIVTEAYSPLG 195          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.187e-28
Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAG 615
            MP +GLG      +E +   A+ +A+++GYR  DTA+ Y  E  +G+A+  A        R++LFITTKLW +D  R     AL++SL+ LQ+DY+DLYL+HWP+ A                   Y   W+ M   Q+ GL K IGV NF    ++ L+  + + P +NQ+E++P  QQRQL  +  +  I   ++SPL   G
Sbjct:   15 MPQLGLGVWKASNEEVI--AAIHKALEVGYRSIDTATAYQNEEGVGKALKAAS-----VAREELFITTKLWNDDQKRPR--EALQESLKKLQLDYLDLYLMHWPVPAIDH----------------YVDAWKGMIALQKEGLVKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGG 193          
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.872e-28
Identity = 78/204 (38.24%), Postives = 109/204 (53.43%), Query Frame = 1
Query:    4 MPVIGLGTAVDKKDENVMKCAVMEAIKLGYRHFDTASEYGTERALGEAIDEALKLGLLTTRQDLFITTKLWLNDAHRDLVVPALKKSLRTLQMDYVDLYLIHWPISAKPSEKLQSLIPKEDLVPLDYKGVWEAMEECQRLGLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAG 615
            MP +GLG       E  +  AV +A+++GYR  DTA+ Y  E  +G+A+  A        R +LFITTKLW +D H      AL+ SL+ LQ+DYVDLYLIHWP             PK+D     Y   W  +   +  GL + IGV NF    ++ L+  + I P+VNQ+E++P  QQRQL  +  +  I   ++SPL   G
Sbjct:   15 MPQLGLGVWQASIQETEL--AVSKALEVGYRSIDTAAIYKNEEGVGKALKAAA-----VARDELFITTKLWNDDQHNPQ--QALETSLQKLQLDYVDLYLIHWPD------------PKQD----HYVSAWRELVTLKEQGLIRSIGVCNFHIPHLQRLIDETGIAPTVNQIELHPLLQQRQLHAWNATHHIATESWSPLAQGG 193          
The following BLAST results are available for this feature:
BLAST of BQ622993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
XYL1_CANSH1.978e-2938.71NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
DKGA_CORSC1.978e-2939.592,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
DKGA_SALTI2.583e-2936.76Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
XYL1_KLULA7.517e-2936.11NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
XYL1_PICGU1.282e-2837.33NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
P100_LEIMA1.282e-2839.11Probable reductase OS=Leishmania major GN=P100/11E... [more]
DKGA_ECOLI1.282e-2836.762,5-diketo-D-gluconic acid reductase A OS=Escheric... [more]
Y2161_MYCVP1.675e-2838.31Uncharacterized oxidoreductase Mvan_2161 OS=Mycoba... [more]
DKGA_SALTY2.187e-2836.272,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_YERPE4.872e-2838.242,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00084 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00084 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622993 ID=BQ622993; Name=BQ622993; organism=Citrus sinensis; type=EST; length=638bp
GAGATGCCGGTGATCGGACTGGGCACGGCGGTTGACAAGAAGGATGAAAA
TGTCATGAAGTGTGCAGTAATGGAAGCAATCAAGCTCGGTTACAGACACT
TTGACACAGCTTCAGAGTACGGGACAGAGAGGGCTCTTGGAGAAGCAATC
GATGAAGCACTTAAACTTGGGCTTCTCACTACTCGCCAAGACCTCTTCAT
TACTACTAAGCTCTGGTTGAATGACGCTCATCGTGACCTCGTTGTCCCAG
CTTTGAAGAAGTCTCTTAGGACCCTTCAGATGGACTATGTTGACCTCTAT
CTCATTCACTGGCCCATCAGTGCAAAGCCAAGTGAGAAATTACAAAGCCT
TATACCCAAAGAAGATCTTGTACCATTGGACTACAAGGGTGTGTGGGAAG
CCATGGAAGAGTGCCAGAGGCTTGGCCTCACTAAGTTCATTGGTGTCAGC
AACTTCTCTTCCAAGAAGATTGAGGCTCTACTCGCCTTCTCTACCATCCC
TCCTTCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAGACAGC
TCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCTCTCCC
TTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGT
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