BQ622997

Overview
NameBQ622997
Unique NameBQ622997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622997 vs. ExPASy Swiss-Prot
Match: MB31_ARATH (Myrosinase-binding protein-like At3g16470 OS=Arabidopsis thaliana GN=At3g16470 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.617e-12
Identity = 28/76 (36.84%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  241 PEEFLVSVSGYYGSIIDYGPVLVRSLVFESNKRKYGPFGLQQGAHFSLPMAGGMIAGFHGRSSWFLESIGVHLKPL 468
            P+E++ +VSGYY  I       + SL F++NKR   P+GL+ G  F L      I GF+G++  +L  +GV++ P+
Sbjct:  374 PDEYVTAVSGYYDKIFSVDAPAIVSLKFKTNKRTSIPYGLEGGTEFVLEKKDHKIVGFYGQAGEYLYKLGVNVAPI 449          

HSP 2 Score: 32.3426 bits (72), Expect = 2.617e-12
Identity = 15/48 (31.25%), Postives = 23/48 (47.92%), Query Frame = 3
Query:   57 GGQN*ARWDDGVFSSVRQVVISYG-AGIDSILIEYDKKGSSVWSDKHG 197
            GG     WDDGV  SV+++ +  G + +     +Y+K    V    HG
Sbjct:  313 GGDGGVAWDDGVHDSVKKIYVGQGDSCVTYFKADYEKASKPVLGSDHG 360          
The following BLAST results are available for this feature:
BLAST of BQ622997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MB31_ARATH2.617e-1236.84Myrosinase-binding protein-like At3g16470 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00088 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00088 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622997 ID=BQ622997; Name=BQ622997; organism=Citrus sinensis; type=EST; length=661bp
GATGAGTTATGAGAGATACGAGGTCGAGGATGACCATGTCATCGGTCGGA
CCATGGGGAGGCCAAAATTGAGCGAGATGGGACGATGGAGTTTTCAGCAG
CGTAAGGCAAGTTGTGATCAGCTATGGAGCTGGCATTGATTCTATTCTAA
TTGAGTACGACAAGAAGGGTTCCTCTGTTTGGTCTGACAAGCATGGCGGG
CAGTGGCGGTTTCAAAACAAATAAGGTCAAGTTTAATTATCCGGAAGAAT
TTCTAGTCTCAGTTAGTGGATACTATGGTAGTATCATTGACTATGGCCCA
GTTCTTGTTCGATCACTTGTGTTCGAAAGCAATAAGAGAAAATATGGACC
CTTTGGCCTTCAACAGGGAGCCCATTTCTCATTACCGATGGCTGGTGGCA
TGATCGCTGGATTTCATGGCAGAAGCAGTTGGTTTCTGGAATCCATTGGA
GTGCATTTAAAGCCTCTCTTGATACAAAATCCACCCATTAACTTAAGTAG
TGCATCACAGAACTATGTAAGCAATGAGATTCCTGAGAAATCTAGAGGCT
TTGAAATGGCAACTACAAGAGAAAAGCAGGACAGCATTTACCAACCTGAA
ATCTTGATTCACAAAAGCGGCTATTCTGGATCAGCGATTCTTAGGGGAAC
TACAACTACTG
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