BQ623013

Overview
NameBQ623013
Unique NameBQ623013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:313..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_ECOLI (Putative peroxiredoxin bcp OS=Escherichia coli (strain K12) GN=bcp PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 58/143 (40.56%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L
Sbjct:   11 PKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWL 152          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_ECOL6 (Putative peroxiredoxin bcp OS=Escherichia coli O6 GN=bcp PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 58/143 (40.56%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L
Sbjct:   11 PKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWL 152          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_ECO57 (Putative peroxiredoxin bcp OS=Escherichia coli O157:H7 GN=bcp PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.463e-23
Identity = 58/143 (40.56%), Postives = 90/143 (62.94%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGV--PADFFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P F+L DQ+G  V+L+ F+G+ V+VYFYP   TPGCT QAC  RD+ ++ KKAG +V+GIS D       FA+K  L +TLLSDE ++V +++GV     F G       R ++++D +G ++ ++++ F+   H D  L +L
Sbjct:   11 PKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQFGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDD-FKTSNHHDVVLNWL 152          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_BACSU (Putative peroxiredoxin ygaF OS=Bacillus subtilis GN=ygaF PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.112e-22
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 2
Query:    2 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKE---WGVPADFFGSLPG--RQTYVLDKNGVVQLIYN-NQFQPEKHIDETLKFL 424
            Q  P   LK   G  V LS +KGK +V+YFYP D TPGCT +AC FRDS+E F +  A +IG+S D    H  F +K+ LP+ LL D+ +K+ +    W +  +F     G  R T+++DK G  +LI    + + + H+ E L+ L
Sbjct:    7 QKAPDLELKGDHGETVKLSDYKGKYIVLYFYPKDMTPGCTTEACDFRDSHESFAELDAVIIGVSPDSQEKHGKFKEKHNLPFLLLVDDEHKLAEAFDVWKLKKNFGKEYMGIERSTFLIDKEG--RLIKEWRKVKVKDHVAEALQTL 151          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_HAEIN (Putative peroxiredoxin bcp OS=Haemophilus influenzae GN=bcp PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18
Identity = 53/145 (36.55%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD--FFGSLPG---RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPS 430
            P+FTL +Q+ + VSLS F+GK V++YFYP   TPGCT QAC  RDS  +    G  V+GIS D       F +K  L +TLLSD  ++V +++GV  +  F G       R +++++++G +  ++ ++F+ + H    + +L S
Sbjct:   11 PAFTLLNQQEKFVSLSDFRGKKVLIYFYPKALTPGCTTQACGLRDSKSELDVLGLVVLGISPDAPKKLAQFIEKKELNFTLLSDPDHQVAEQFGVWGEKKFMGRTYDGIHRISFLINESGTIMQVF-DKFKIKDHHQMIIDYLRS 154          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_BUCAP (Putative peroxiredoxin bcp OS=Buchnera aphidicola subsp. Schizaphis graminum GN=bcp PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.085e-18
Identity = 56/147 (38.10%), Postives = 85/147 (57.82%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPAD-------FFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPS 430
            P F L +   +++ LS F GK V+VYFYP   TPGCT QAC  RD+ E FK    EV+GIS D+++    F +K  L +TLLSD+ N V K++GV  +       +FG    R +++++ +G +  I+  +F+ + H    L +L S
Sbjct:   11 PKFILPNCIDKSIKLSDFLGKKVLVYFYPKAMTPGCTVQACNIRDNLELFKSKKVEVLGISPDNTNKLLTFVEKKMLNFTLLSDKQNIVSKKFGVWGEKIFMGKKYFGIY--RTSFLINSSGFIDKIF-FKFKCKDHHKIILTYLNS 154          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRX_SCHPO (Peroxiredoxin C1773.02c OS=Schizosaccharomyces pombe GN=SPBC1773.02c PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.015e-16
Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKG-KPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPSS 433
            P  TL D++G ++ L      K +V++ YP   TPGCTKQ C FRD+Y K + +  EV+G+S D S + KAF  K   PY LLSD   ++ K+ G      G L  R  ++ +K     ++      P   +D+    +  S
Sbjct:   53 PDITLPDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGCGFRDNYPKIQASDYEVLGLSFDTSKAQKAFKDKQNFPYHLLSDPKGELIKKLGAEKPGGGKL-FRSHWIFEKGTGKCIVKEIDISPLVSVDKAFAVITDS 193          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_HELPJ (Putative peroxiredoxin bcp OS=Helicobacter pylori J99 GN=bcp PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16
Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 2
Query:    2 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNKVR---KEWGVPADFFGSLPG--RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P F LK+ +G  +SL     K VV+YFYP D TPGCT +A  F   + +F+K  A V+G+S D+S SH+ F  +  L   LL DE  KV    K +G    +     G  R T++++  GV++  + N  + + H  + L+ L
Sbjct:    8 QLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGVSPDNSQSHQKFISQCSLNVILLCDEDKKVANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYN-VKAKGHAQKVLESL 152          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BCP_HELPY (Putative peroxiredoxin bcp OS=Helicobacter pylori GN=bcp PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.595e-16
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 2
Query:    2 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSDEGNK---VRKEWGVPADFFGSLPG--RQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P F LK+ +G  +SL     K VV+YFYP D TPGCT +A  F   + +F+K  A V+GIS D++ SH+ F  +  L   LL DE  K   + K +G    +     G  R T++++  GV++  + N  + + H  + L+ L
Sbjct:    8 QLAPDFRLKNSDGVEISLKDLLHKKVVLYFYPKDNTPGCTLEAKDFSALFSEFEKKNAVVVGISPDNAQSHQKFISQCSLNVILLCDEDKKAANLYKAYGKRMLYGKEHLGIIRSTFIINTQGVLEKCFYN-VKAKGHAQKVLESL 152          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE  NV LS + GK  V+++FYP D T  C  +  AF D +E+F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DETL+ L
Sbjct:   34 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTL 172          
The following BLAST results are available for this feature:
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
BCP_ECOLI1.463e-2340.56Putative peroxiredoxin bcp OS=Escherichia coli (st... [more]
BCP_ECOL61.463e-2340.56Putative peroxiredoxin bcp OS=Escherichia coli O6 ... [more]
BCP_ECO571.463e-2340.56Putative peroxiredoxin bcp OS=Escherichia coli O15... [more]
BCP_BACSU2.112e-2239.46Putative peroxiredoxin ygaF OS=Bacillus subtilis G... [more]
BCP_HAEIN1.085e-1836.55Putative peroxiredoxin bcp OS=Haemophilus influenz... [more]
BCP_BUCAP1.085e-1838.10Putative peroxiredoxin bcp OS=Buchnera aphidicola ... [more]
PRX_SCHPO1.015e-1633.80Peroxiredoxin C1773.02c OS=Schizosaccharomyces pom... [more]
BCP_HELPJ1.732e-1635.62Putative peroxiredoxin bcp OS=Helicobacter pylori ... [more]
BCP_HELPY8.595e-1634.93Putative peroxiredoxin bcp OS=Helicobacter pylori ... [more]
BAS1_WHEAT1.621e-1436.432-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00104 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00104 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623013 ID=BQ623013; Name=BQ623013; organism=Citrus sinensis; type=EST; length=482bp
ACAGGCGCCTCCTTCCTTCACATTGAAAGATCAAGAGGGCAGGAATGTGA
GCCTATCCAAGTTTAAAGGGAAGCCCGTGGTTGTTTATTTTTACCCTGCT
GATGAGACACCTGGCTGCACCAAACAGGCATGCGCTTTTAGGGATTCTTA
TGAGAAATTTAAGAAAGCAGGAGCTGAGGTTATTGGGATTAGTGGTGATG
ATTCATCGTCACACAAGGCATTTGCAAAAAAGTATAGGCTTCCATATACA
TTGCTGAGCGACGAGGGTAACAAGGTGAGGAAAGAATGGGGGGTTCCAGC
AGACTTCTTTGGATCATTGCCTGGGAGACAGACTTACGTTCTTGACAAGA
ATGGAGTGGTTCAGCTCATCTACAACAACCAGTTCCAACCTGAAAAACAC
ATTGATGAGACCTTGAAGTTTCTTCCAAGTAGTTGAACATCTCAATGTAT
TGCCTTGTTCATGCTTGATTACAAATCCTCTG
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