BQ623013

Overview
NameBQ623013
Unique NameBQ623013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:313..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE  NV LS + GK  V+++FYP D T  C  +  AF D Y++F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ L
Sbjct:   84 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTL 222          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE  NV LS + GK  V+++FYP D T  C  +  AF D +E+F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DETL+ L
Sbjct:   34 DQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTL 172          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: DOT5_YEAST (Peroxiredoxin DOT5 OS=Saccharomyces cerevisiae GN=DOT5 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSD 262
            P  +L +++  ++SL K     + VV + YP   TPGCT+QAC FRD+Y++ KK  A V G+S D  +S K F  K  LPY LLSD
Sbjct:   70 PDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGCTRQACGFRDNYQELKKYAA-VFGLSADSVTSQKKFQSKQNLPYHLLSD 154          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.611e-14
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE   V LS++ GK  V+++FYP D T  C  +  AF D YE+F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ L
Sbjct:   94 DQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTL 232          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: YCF42_PORPU (Putative peroxiredoxin ycf42 OS=Porphyra purpurea GN=ycf42 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 2
Query:    2 QAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P F+   + DQE + + LS FK K V+++FYP D T  C  +  AF D Y  F +   E++G+S D   SH A+ +  R       L Y L+SD   ++   + V     G +  R  +++D  G++Q    N  +  + ++ETL+ L
Sbjct:   12 QIAPDFSATAVYDQEFKTIKLSDFKNKYVILFFYPLDFTFVCPTEITAFSDKYSDFSELNTEILGVSVDSEYSHLAWLQTDRESGGLGDLEYPLVSDLKKEISIAYNVLNS--GGVALRGLFIIDPKGIIQYSTVNNLEFGRSVEETLRVL 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.044e-14
Identity = 42/147 (28.57%), Postives = 84/147 (57.14%), Query Frame = 2
Query:    2 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P FT+   +G  ++LS ++GK V+++ +P D TP CT +  AF + YE F+K G E+IG+S D   SH A+ +  +      +P+ +++D   +V +E+ +  +  G+   R  +++D N +V+ +     +  ++I+E ++ +
Sbjct:    7 QKAPDFTVNTSKGP-ITLSNYRGKWVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHFGIDIPFPIIADIDKEVAREYNLIDEKSGATV-RGVFIIDPNQIVRWMIYYPAETGRNIEEIIRVI 151          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.341e-13
Identity = 48/151 (31.79%), Postives = 77/151 (50.99%), Query Frame = 2
Query:    2 QAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P FT   + DQ  + V LS ++GK +V++FYP D T  C  +  AF D + +F     EV+GIS D   SH A+ +  R       + Y L+SD   ++ + + V     G +  R  +++D+ G++Q    N     + +DETL+ L
Sbjct:    9 QPAPDFTATAIVDQSFQTVKLSTYRGKYLVLFFYPLDFTFVCPTEIIAFSDRHSEFTALDTEVVGISVDSEFSHLAWIQTERKMGGIGNINYPLVSDLKKEISQAYNVLEPDAG-IALRGLFIIDREGILQYATVNNLSFGRSVDETLRVL 158          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDX_ECHGR (Thioredoxin peroxidase OS=Echinococcus granulosus GN=TPX PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.057e-13
Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 2
Query:   11 PSFTLK---DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            PSFT K   D E ++VSLS ++GK V+++FYP D T  C  +  AF D  ++F + G +++  S D    H A+    R       +   +L+D  +K+ +++GV  +  G +  R  +++D  GV++ I  N     + +DE L+ L
Sbjct:   10 PSFTCKALVDGELKDVSLSDYRGKYVILFFYPMDFTFVCPTEIIAFNDRADEFHQRGCQLLACSTDSGYCHLAWNNVSRKEGGVQGMRIPMLADTNHKISRDYGVLIEDQG-IALRGLFIIDDKGVLRQITINDLPVGRSVDEALRLL 156          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX_ASCSU (Peroxiredoxin OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.057e-13
Identity = 45/148 (30.41%), Postives = 79/148 (53.38%), Query Frame = 2
Query:   11 PSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P FT   + D + +++SLS +KGK VV++FYP D T  C  +  AF +   +FKK G EV+  S D   SH A+    R       +   ++SD  +++ +++GV  +  G +  R  +++D  G+++ I  N     + + ETL+ +
Sbjct:   11 PEFTATAVVDGDFKSISLSDYKGKYVVLFFYPMDFTFVCPTEIIAFSEHVGEFKKLGVEVLAASTDSQFSHLAWINTPRKQGGLGEMKIPIISDNNHQISRDYGVLKEDDG-IAYRGLFIIDPKGILRQITVNDLPVGRSVTETLRLV 157          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDX_ONCMY (Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.992e-13
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 2
Query:   11 PSFTLK----DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P FT K    D + +++S+S ++GK VV +FYP D T  C  +  AF D+ E+F+K G EVIG S D    H A+    R       +   L++D    +  ++GV      + P    +++D  GV++ I  N     + +DE L+ +
Sbjct:   13 PGFTAKAVMPDGQFKDISMSDYRGKYVVFFFYPLDFTFVCPTEIIAFSDAAEEFRKIGCEVIGASVDSHFCHLAWTNTPRKHGGLGAMKIPLVADTMRSISTDYGVFEGGMRASPTGGLFIIDDKGVLRQITINDLPVGRCVDEILRLV 161          
The following BLAST results are available for this feature:
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
BAS1_ORYSJ1.621e-1435.712-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza s... [more]
BAS1_HORVU1.621e-1436.432-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
DOT5_YEAST3.611e-1445.35Peroxiredoxin DOT5 OS=Saccharomyces cerevisiae GN=... [more]
BAS1B_ARATH3.611e-1436.432-Cys peroxiredoxin BAS1-like, chloroplastic OS=Ar... [more]
YCF42_PORPU8.044e-1431.13Putative peroxiredoxin ycf42 OS=Porphyra purpurea ... [more]
TDXH_THEVO8.044e-1428.57Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]
Y755_SYNY32.341e-1331.79Putative peroxiredoxin sll0755 OS=Synechocystis sp... [more]
TDX_ECHGR3.057e-1331.08Thioredoxin peroxidase OS=Echinococcus granulosus ... [more]
PRDX_ASCSU3.057e-1330.41Peroxiredoxin OS=Ascaris suum PE=2 SV=1[more]
TDX_ONCMY3.992e-1330.87Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00104 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00104 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623013 ID=BQ623013; Name=BQ623013; organism=Citrus sinensis; type=EST; length=482bp
ACAGGCGCCTCCTTCCTTCACATTGAAAGATCAAGAGGGCAGGAATGTGA
GCCTATCCAAGTTTAAAGGGAAGCCCGTGGTTGTTTATTTTTACCCTGCT
GATGAGACACCTGGCTGCACCAAACAGGCATGCGCTTTTAGGGATTCTTA
TGAGAAATTTAAGAAAGCAGGAGCTGAGGTTATTGGGATTAGTGGTGATG
ATTCATCGTCACACAAGGCATTTGCAAAAAAGTATAGGCTTCCATATACA
TTGCTGAGCGACGAGGGTAACAAGGTGAGGAAAGAATGGGGGGTTCCAGC
AGACTTCTTTGGATCATTGCCTGGGAGACAGACTTACGTTCTTGACAAGA
ATGGAGTGGTTCAGCTCATCTACAACAACCAGTTCCAACCTGAAAAACAC
ATTGATGAGACCTTGAAGTTTCTTCCAAGTAGTTGAACATCTCAATGTAT
TGCCTTGTTCATGCTTGATTACAAATCCTCTG
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