BQ623013

Overview
NameBQ623013
Unique NameBQ623013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:313..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12
Identity = 42/150 (28.00%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPSS*TS 442
            P   +K   G+ V    F+GK  V++ +PAD TP CT +  AF+  Y++F+K   E+IG+S D   SH  + +  +      + + +++D+  +V +  G+     G+   R  +++D NG+++ I     +  ++IDE L+ + +  TS
Sbjct:   13 PRVEVKTTHGKKVLPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKLGVEIEFPVIADDLGEVSRRLGLIHPNKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVKALQTS 162          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX2_RAT (Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12
Identity = 47/148 (31.76%), Postives = 75/148 (50.68%), Query Frame = 2
Query:   11 PSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P FT   + D   + + LS ++GK VV++FYP D T  C  +  AF D  E F+K G EV+G+S D   +H A+    R       L   LL+D    + + +GV  +  G +  R  +++D  GV++ I  N     + +DE L+ +
Sbjct:   13 PDFTGTAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEG-IAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLV 159          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.981e-12
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   11 PSFT----LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P FT    + D + +++ LS ++GK VV +FYP D T  C  +  A+ D  ++FKK   E+IG S D    H A+    +       +   L+SD    + K++GV  +  G +  R  +++D+ G+++ I  N     + +DETL+ +
Sbjct:   13 PDFTATAVMPDGQFKDIKLSDYRGKYVVFFFYPLDFTFVCPTEIIAYSDRADEFKKINCEIIGASVDSHFCHLAWINTPKKQGGLGTMKIPLVSDTKRVIAKDYGVLKEDEG-IAYRGLFIIDEKGILRQITINDLPVGRSVDETLRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAK------KYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLK 418
            P   +   +GR      +KG+  V++ +P D TP CT +  +F   YE+FKK   E+IG+S D + SH  +        K  +P+ +++D    V K  G+      +   R  +V+D  GVV+LI     +  ++IDE L+
Sbjct:   14 PEMEVITTQGRIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLKVEIPFPIIADPMGNVAKRLGMIHAQSSTATVRAVFVVDDKGVVRLILYYPMEIGRNIDEILR 155          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_HUMAN (Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.588e-12
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   23 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            + D + +++SLS +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DETL+ +
Sbjct:   21 MPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWVNTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX3_PONAB (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Pongo abelii GN=PRDX3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E +++SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +
Sbjct:   81 EFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLV 216          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX3_HUMAN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Homo sapiens GN=PRDX3 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E +++SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +
Sbjct:   81 EFKDLSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGSG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLV 216          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_MYOLU (Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   23 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            + D + +++SLS +KGK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DETL+ +
Sbjct:   21 MPDGQFKDISLSDYKGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKINCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITVNDLPVGRSVDETLRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_GECJA (Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 43/141 (30.50%), Postives = 72/141 (51.06%), Query Frame = 2
Query:   23 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            + D + + + LS +KGK VV++FYP D T  C  +  AF D  E+F+K   EVIG S D    H A+    +       +   L+SD    + K++G+  +  G +  R  +++D  G ++ I  N     + +DETL+ +
Sbjct:   21 MPDGQFKEIKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRSEEFRKINCEVIGASVDSHFCHLAWINTPKKQGGLGSMHIPLVSDTKRVIAKDYGILKEDEG-ISYRGLFIIDDKGTLRQITINDLPVGRSVDETLRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX3_BOVIN (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Bos taurus GN=PRDX3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E + +SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +   LLSD   ++ +++GV  +  G L  R  +++D NGV++ +  N     + ++ETL+ +
Sbjct:   82 EFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPG-LALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLV 217          
The following BLAST results are available for this feature:
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TDXH_THEMA1.981e-1228.00Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
PRDX2_RAT1.981e-1231.76Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1... [more]
PRDX1_CHICK1.981e-1229.53Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=... [more]
TDXH_SULSO2.588e-1230.28Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
PRDX1_HUMAN2.588e-1231.69Peroxiredoxin-1 OS=Homo sapiens GN=PRDX1 PE=1 SV=1[more]
PRDX3_PONAB3.380e-1231.39Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX3_HUMAN3.380e-1231.39Thioredoxin-dependent peroxide reductase, mitochon... [more]
PRDX1_MYOLU3.380e-1231.69Peroxiredoxin-1 OS=Myotis lucifugus GN=PRDX1 PE=1 ... [more]
PRDX1_GECJA3.380e-1230.50Peroxiredoxin-1 OS=Gecko japonicus GN=PRDX1 PE=2 S... [more]
PRDX3_BOVIN4.414e-1231.39Thioredoxin-dependent peroxide reductase, mitochon... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00104 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00104 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623013 ID=BQ623013; Name=BQ623013; organism=Citrus sinensis; type=EST; length=482bp
ACAGGCGCCTCCTTCCTTCACATTGAAAGATCAAGAGGGCAGGAATGTGA
GCCTATCCAAGTTTAAAGGGAAGCCCGTGGTTGTTTATTTTTACCCTGCT
GATGAGACACCTGGCTGCACCAAACAGGCATGCGCTTTTAGGGATTCTTA
TGAGAAATTTAAGAAAGCAGGAGCTGAGGTTATTGGGATTAGTGGTGATG
ATTCATCGTCACACAAGGCATTTGCAAAAAAGTATAGGCTTCCATATACA
TTGCTGAGCGACGAGGGTAACAAGGTGAGGAAAGAATGGGGGGTTCCAGC
AGACTTCTTTGGATCATTGCCTGGGAGACAGACTTACGTTCTTGACAAGA
ATGGAGTGGTTCAGCTCATCTACAACAACCAGTTCCAACCTGAAAAACAC
ATTGATGAGACCTTGAAGTTTCTTCCAAGTAGTTGAACATCTCAATGTAT
TGCCTTGTTCATGCTTGATTACAAATCCTCTG
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