BQ623013

Overview
NameBQ623013
Unique NameBQ623013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:313..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.677e-11
Identity = 38/125 (30.40%), Postives = 66/125 (52.80%), Query Frame = 2
Query:   62 FKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAK------KYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLK 418
            ++GK  V++ +P D TP CT +  +F   YE+FKK   E+IG+S D + SH  +        K  +P+ +++D    V K  G+      +   R  +++D  G+V+LI     +  ++IDE L+
Sbjct:   31 YQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLKVEIPFPIIADPMGNVAKRLGMIHAESSTSTVRAVFIVDDKGIVRLIMYYPMEIGRNIDEILR 155          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: RESA_BACHK (Thiol-disulfide oxidoreductase resA OS=Bacillus thuringiensis subsp. konkukian GN=resA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.861e-11
Identity = 43/138 (31.16%), Postives = 76/138 (55.07%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS-SHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNG-VVQLIYNNQFQPEKHIDETLK 418
            P+F + D EG+ + L  FKGK V + F+     P C K+     + Y K+K+ G E+I +  D++  + K F K+Y L + +  D+G ++ K +GV       +P   ++++DK+G V+Q I     Q ++ ++E LK
Sbjct:   42 PNFVVTDLEGKKIELKDFKGKGVFLNFWGTWCKP-CEKEMPYMNELYPKYKEKGVEIIALDADETDIAVKNFVKQYDLKFPVAIDKGGEIIKTYGV-------IPLPTSFLIDKDGKVIQEIKGE--QTKEQLEEYLK 169          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: RESA_BACC1 (Thiol-disulfide oxidoreductase resA OS=Bacillus cereus (strain ATCC 10987) GN=resA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.861e-11
Identity = 43/138 (31.16%), Postives = 76/138 (55.07%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS-SHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNG-VVQLIYNNQFQPEKHIDETLK 418
            P+F + D EG+ + L  FKGK V + F+     P C K+     + Y K+K+ G E+I +  D++  + K F K+Y L + +  D+G ++ K +GV       +P   ++++DK+G V+Q I     Q ++ ++E LK
Sbjct:   42 PNFVVTDLEGKKIELKDFKGKGVFLNFWGTWCKP-CEKEMPYMNELYPKYKEKGVEIIALDADETDIAVKNFVKQYDLKFPVAIDKGGEIIKTYGV-------IPLPTSFLIDKDGKVIQEIKGE--QTKEQLEEYLK 169          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX4_RAT (Peroxiredoxin-4 OS=Rattus norvegicus GN=Prdx4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.861e-11
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E + + L+ ++GK +V +FYP D T  C  +  AF D  E+FK    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  GV++ I  N     + +DETL+ +
Sbjct:   99 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTL-RGLFIIDDKGVLRQITLNDLPVGRSVDETLRLV 234          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX4_MOUSE (Peroxiredoxin-4 OS=Mus musculus GN=Prdx4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.861e-11
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E + + L+ ++GK +V +FYP D T  C  +  AF D  E+FK    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  GV++ I  N     + +DETL+ +
Sbjct:  100 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTL-RGLFIIDDKGVLRQITLNDLPVGRSVDETLRLV 235          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_MOUSE (Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.861e-11
Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 2
Query:   23 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            + D + +++SLS++KGK VV +FYP D T  C  +  AF D  ++FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DE ++ +
Sbjct:   21 MPDGQFKDISLSEYKGKYVVFFFYPLDFTFVCPTEIIAFSDRADEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLISDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDEIIRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX1_CRIGR (Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.737e-11
Identity = 43/142 (30.28%), Postives = 73/142 (51.41%), Query Frame = 2
Query:   23 LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            + D + R++ LS+++GK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DE L+ +
Sbjct:   21 MPDGQFRDICLSEYRGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLV 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX4_HUMAN (Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.880e-11
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            D E + + L+ ++GK +V +FYP D T  C  +  AF D  E+F+    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  G+++ I  N     + +DETL+ +
Sbjct:   95 DGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL-RGLFIIDDKGILRQITLNDLPVGRSVDETLRLV 232          
The following BLAST results are available for this feature:
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TDXH2_SULTO1.677e-1130.40Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
RESA_BACHK2.861e-1131.16Thiol-disulfide oxidoreductase resA OS=Bacillus th... [more]
RESA_BACC12.861e-1131.16Thiol-disulfide oxidoreductase resA OS=Bacillus ce... [more]
PRDX4_RAT2.861e-1130.66Peroxiredoxin-4 OS=Rattus norvegicus GN=Prdx4 PE=2... [more]
PRDX4_MOUSE2.861e-1130.66Peroxiredoxin-4 OS=Mus musculus GN=Prdx4 PE=1 SV=1[more]
PRDX1_MOUSE2.861e-1129.58Peroxiredoxin-1 OS=Mus musculus GN=Prdx1 PE=1 SV=1[more]
PRDX1_CRIGR3.737e-1130.28Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=... [more]
PRDX4_HUMAN4.880e-1129.50Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00104 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00104 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623013 ID=BQ623013; Name=BQ623013; organism=Citrus sinensis; type=EST; length=482bp
ACAGGCGCCTCCTTCCTTCACATTGAAAGATCAAGAGGGCAGGAATGTGA
GCCTATCCAAGTTTAAAGGGAAGCCCGTGGTTGTTTATTTTTACCCTGCT
GATGAGACACCTGGCTGCACCAAACAGGCATGCGCTTTTAGGGATTCTTA
TGAGAAATTTAAGAAAGCAGGAGCTGAGGTTATTGGGATTAGTGGTGATG
ATTCATCGTCACACAAGGCATTTGCAAAAAAGTATAGGCTTCCATATACA
TTGCTGAGCGACGAGGGTAACAAGGTGAGGAAAGAATGGGGGGTTCCAGC
AGACTTCTTTGGATCATTGCCTGGGAGACAGACTTACGTTCTTGACAAGA
ATGGAGTGGTTCAGCTCATCTACAACAACCAGTTCCAACCTGAAAAACAC
ATTGATGAGACCTTGAAGTTTCTTCCAAGTAGTTGAACATCTCAATGTAT
TGCCTTGTTCATGCTTGATTACAAATCCTCTG
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