BQ623015

Overview
NameBQ623015
Unique NameBQ623015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig444 contig Csv1_Contig444:62..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.322e-41
Identity = 80/99 (80.81%), Postives = 86/99 (86.87%), Query Frame = 2
Query:  227 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            +EVLLG  DG LAFVP+SF VS+G+ IVFKNNAGFPHNVVFDEDEIPSGVD +KISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:    1 VEVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 99          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.726e-41
Identity = 86/154 (55.84%), Postives = 103/154 (66.88%), Query Frame = 2
Query:   65 GLKAGATPARVVGSTMKASASAVPKLSIKATLKD-VGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            GLKAG  P     S    +  +    S+KA+ K+ +G                  +EVLLGG DGSLAFVPS+  V++GE +VFKNNAGFPHNV+FDEDE+P GVD   ISM  EDLLN PGET++VTL EKGTYS YCSPHQGAGM G++TVN
Sbjct:   16 GLKAGRAPTTPSTSIKPPTPMS---FSVKASFKEAIGTALVATAAGAVLASNALAVEVLLGGSDGSLAFVPSNIEVAAGETVVFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 9.803e-37
Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 2
Query:  227 IEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            +EVL+GG  G LAF+P+   V++GE+IVFKNNAGFPHNV+FDED +P+GVDVS ISMS EDLLN PGETY V L +KGTY F+C+PHQG GM G VTVN
Sbjct:    1 VEVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.415e-35
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 2
Query:  230 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            EV LG DDG L F PSSF+V++GEKI FKNNAGFPHN+VFDEDE+P+GV+  KIS    + LNG GETY VTLTEKGTY FYC PH GAGM G+VTVN
Sbjct:    2 EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAGVNAEKISQ--PEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTVN 97          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.153e-35
Identity = 71/97 (73.20%), Postives = 80/97 (82.47%), Query Frame = 2
Query:  230 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 520
            EV LG DDG+L F PSSFSV+ GE I FKNNAGFPHN+VFDEDE+P+GVDVSKIS   ED L+G GE++ VTLTEKGTY FYC PH GAGM G+VTV
Sbjct:    2 EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.487e-34
Identity = 70/98 (71.43%), Postives = 78/98 (79.59%), Query Frame = 2
Query:  230 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHNVVFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.487e-34
Identity = 70/98 (71.43%), Postives = 78/98 (79.59%), Query Frame = 2
Query:  230 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            EVLLG + G L F P+ F+V SGE I FKNNAGFPHNVVFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.588e-33
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 2
Query:  230 EVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            +VLLG + G L F P+ FSV +GE I FKNNAG+PHNVVFDED +PSGVDVSKIS   E+ L  PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   60 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 155          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.804e-30
Identity = 70/155 (45.16%), Postives = 88/155 (56.77%), Query Frame = 2
Query:   65 GLKAG--ATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 523
            GLKA   A PAR+  +++   A  V   +    LK VG                    V +GGDDG+L F P   SV++GE + F NN GFPHNVVFDED +P+GV    I  + ED LNGP E++++T    GTY FYC PHQGAGM G VTV+
Sbjct:   16 GLKAETKAAPARLSSTSVVRMAPVVRASASSDALKTVGKALLAASSSLLLVASANAATVKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAGVKTEDI--NHEDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTVS 168          
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.859e-28
Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 2
Query:  233 VLLGGDDGSLAFVPSSFSVSSGEKIVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 520
            V LG D G+L FVP + ++ SGE + F NNAGFPHN+VFDED IPSGV+   I  S +D LN PGETY+V LT  G Y +YC PHQGAGMVG++ V
Sbjct:   51 VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAI--SRDDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144          
The following BLAST results are available for this feature:
BLAST of BQ623015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PLAS_VICFA1.322e-4180.81Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1[more]
PLAS_FRIAG1.726e-4155.84Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]
PLAS_GINBI9.803e-3769.70Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1[more]
PLAS_PETCR2.415e-3571.43Plastocyanin A/B OS=Petroselinum crispum GN=PETE P... [more]
PLAS_DAUCA3.153e-3573.20Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1[more]
PLAS_ORYSJ3.487e-3471.43Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_ORYSI3.487e-3471.43Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_HORVU8.588e-3368.37Plastocyanin, chloroplastic OS=Hordeum vulgare GN=... [more]
PLAS_PHYPA6.804e-3045.16Plastocyanin, chloroplastic OS=Physcomitrella pate... [more]
PLAS_CHLRE2.859e-2860.42Plastocyanin, chloroplastic OS=Chlamydomonas reinh... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00106 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00106 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623015 ID=BQ623015; Name=BQ623015; organism=Citrus sinensis; type=EST; length=559bp
AACCCCATTTACAGTTACAATGGCTACTGTCACCTCTGCAGCTGTCACCG
TCCCAACTTTCACCGGCCTTAAAGCCGGTGCAACACCAGCCAGAGTTGTT
GGTTCCACCATGAAGGCCTCAGCCTCTGCTGTCCCAAAGCTCAGCATCAA
GGCCACACTCAAAGATGTTGGAGTGGCCGTTGCGGCCACAGCTGCCAGCG
CAATGCTTGCTAGCAATGCCATGGCCATTGAGGTTTTGCTTGGTGGTGAT
GATGGGTCCTTGGCTTTTGTTCCAAGCTCTTTCTCTGTCAGCTCCGGTGA
AAAGATTGTGTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCG
ATGAAGATGAGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCT
ACAGAAGACCTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGAC
TGAAAAAGGCACTTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCA
TGGTTGGACAAGTGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCC
TCATCTCAT
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