BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:377..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.781e-45
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            K+   ETDS YD EKL ER+AKL+GGVAVI+VGAATETEL+++K R+EDA  AT AA+EEGIVPGGGA LVH    +PA++    + DE +G  IV++AL  P   IA NA              +   G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+LTT+AI+ E PK + +
Sbjct:  349 KKQIEETDSDYDREKLQERLAKLAGGVAVIRVGAATETELKEKKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAIIAEIPKEEKA 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.016e-44
Identity = 101/179 (56.42%), Postives = 121/179 (67.60%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K    ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV + + V A++      D   G  IV KAL AP   IA NA             +E   GYNA TD++ NM+ AG++DP KVTR ALQNAASVA M LTT+A+V E P+
Sbjct:  348 KAQIEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAAVE---ATGDVATGVKIVLKALEAPIRQIAENAGLEGSVIVEKIKHAETGVGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAVVAEMPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.016e-44
Identity = 97/193 (50.26%), Postives = 133/193 (68.91%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            K+   ET S +D EKL ER+AKLSGGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG VPGGG ALV++   V A++   E+ D + G +IV++AL  P   IA NA            + +   G+NA T+++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+V +KP+ +++     T   G
Sbjct:  348 KKQISETTSDFDREKLQERLAKLSGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTALVNVIGKVAALE---EEGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKLKEQKPGVGFNAATNEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPEPESNNQMPATPGMG 537          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.733e-44
Identity = 101/184 (54.89%), Postives = 123/184 (66.85%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKA 591
            C   KR    +DS+Y+ EKL ER+AKLSGGVAVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGG+  VH+S  +          DE +GA IVQ+AL  P   IA NA             +++  GY+A   K  NM  AG+IDPAKV R ALQNA S+A MVLTT+ IVV+K +A
Sbjct:  345 CEQIKRQIETSDSLYEREKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGSTNVHISGELFVWAKNNLFEDELIGALIVQRALTYPLRRIAFNAGDNGAVVVEKVKTNDFCIGYDASNGKIVNMYDAGIIDPAKVARSALQNATSIAAMVLTTECIVVDKLEA 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.733e-44
Identity = 98/180 (54.44%), Postives = 125/180 (69.44%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            E+ S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T A +EEG+VPGGG ALV++   V    +   + DE  GA IV +AL  P   I HNA              +   GYNA TD++ NM++AG++DP KVTR ALQNAASVA M LTT+A+V +KP+ +N G+
Sbjct:  353 ESTSDFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQV---SELTLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPE-ENGGA 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.733e-44
Identity = 97/185 (52.43%), Postives = 124/185 (67.03%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            K    ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+K      DE  G +IV +AL  P   IAHNA              E   GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A++ +KP+    G+
Sbjct:  348 KAQVEETTSEFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAVIADKPEENAGGA 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_HELMI (60 kDa chaperonin OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=groL PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.264e-44
Identity = 97/187 (51.87%), Postives = 129/187 (68.98%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRS 612
            +R   E+ S +D EKL ER+AKL+GGVAVI+VGAATETEL+D+KLRIEDA NAT AA+EEGIVPGGG ALV +   +  ++      DE  G  I+++AL  P   IA+NA                  G+NA T+ YE+M+ AG++DPAKVTR ALQNAAS+A M+LTT+AIV +KP+ +++ + S
Sbjct:  348 RRQHEESTSEFDKEKLQERLAKLAGGVAVIQVGAATETELKDKKLRIEDALNATRAAVEEGIVPGGGTALVSIQKALDNVETPA--GDEATGVAIIRRALEEPLRQIANNAGYEGSVVVEKVKSLPVGQGFNAATEVYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTEAIVADKPEKKDAPAMS 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.264e-44
Identity = 96/180 (53.33%), Postives = 127/180 (70.56%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + D + G +IV +AL  P   IAHNA            + +   G+NA T ++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+V +KP+    G+
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAVVADKPEENAGGA 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.264e-44
Identity = 92/189 (48.68%), Postives = 132/189 (69.84%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE++GA IV KAL AP   IA NA                + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A++ + P+ ++S +
Sbjct:  346 CESIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEALIADIPEEKSSSA 534          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.957e-44
Identity = 100/198 (50.51%), Postives = 131/198 (66.16%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE--KPKAQNSGSRSDTRSYGVI 636
            K      +  Y+ EKL+ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG  L+ L+  V AIKD L + +E++GADIV++AL  P  LIA NA             S+    GYNA T KYE+++ AG+IDP KV RC L++A+SVA   L +  +VVE  +P++   G+  D   YG I
Sbjct:  398 KNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAPVGNPMDNSGYGNI 595          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_MOOTA7.781e-4552.4660 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH60_MACCJ1.016e-4456.4260 kDa chaperonin OS=Macrococcus caseolyticus (str... [more]
CH60_LACS11.016e-4450.2660 kDa chaperonin OS=Lactobacillus salivarius subs... [more]
CH60_PORPU1.733e-4454.8960 kDa chaperonin, chloroplastic OS=Porphyra purpu... [more]
CH60_OCEIH1.733e-4454.4460 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH60_BACSK1.733e-4452.4360 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH60_HELMI2.264e-4451.8760 kDa chaperonin OS=Heliobacterium modesticaldum ... [more]
CH60_BACA22.264e-4453.3360 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH601_CHLCV2.264e-4448.6860 kDa chaperonin 1 OS=Chlamydophila caviae GN=gro... [more]
RUBB_PEA2.957e-4450.51RuBisCO large subunit-binding protein subunit beta... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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