BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:377..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_THEAB (60 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groL PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.587e-44
Identity = 98/193 (50.78%), Postives = 133/193 (68.91%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSY 627
            K    +T S Y+ E L ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEGIVPGGG  L+     V  + ++L D DE++GA IV +AL+AP + IA NA            +++    G++A+  +Y NM + G+IDPAKVTR ALQNAAS+A M+LTT+A+VVEKP+ +N+    +   Y
Sbjct:  348 KAQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKAVEKVVNEL-DGDEKIGAKIVYEALIAPINQIAKNAGYDGAIIIHKVLENDDPAYGFDALKGEYCNMFERGIIDPAKVTRSALQNAASIASMLLTTEALVVEKPEPKNNAPMPEMPEY 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_PHATR (60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum GN=groL PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.587e-44
Identity = 94/187 (50.27%), Postives = 127/187 (67.91%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDH-VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQN 597
            C   ++     D+ Y+ EKL +RIAKLSGG+AVI+VGA TETE++D+KLR+EDA NAT AA+EEGIVPGGGA L HLS++ V   K+ L++ DE +GA I+ +A++AP   IA NA              E+  GYNA  + + NM   G++DPAKVTR  LQNA S+A M+LTT+ I+V+  K+ N
Sbjct:  346 CEQLRKQVNIADTGYEKEKLQDRIAKLSGGIAVIRVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATLTHLSENLVTWAKNNLKE-DELIGAMIISRAILAPLRRIAENAGINGPVIIEKVQQQEFEIGYNAAKNTFGNMYTEGIVDPAKVTRSGLQNATSIASMILTTECIIVDDVKSSN 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHLMU (60 kDa chaperonin OS=Chlamydia muridarum GN=groL PE=2 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 6.587e-44
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DER+GA IV KAL AP   IA NA                  GY+A+ D Y +M++AG++DPAKVTR AL++AASVAG++LTT+A++ E P+
Sbjct:  346 CESIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDERIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMIEAGILDPAKVTRSALESAASVAGLLLTTEALIAEIPE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 98/178 (55.06%), Postives = 124/178 (69.66%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            KR   ET+S YD EKL ER+AKLSGGVAVI+VGAATETEL++RK RIEDA  AT AA+EEGIV GGG  L++    + AI+      DE  G ++V+KA+  P   IA+NA            ++E   GYNA+T  YE+M+ AG+IDPAKVTR A+QNAAS++ MVLTT+A+V E P
Sbjct:  349 KRQLEETESEYDREKLQERLAKLSGGVAVIQVGAATETELKERKHRIEDALAATKAAVEEGIVSGGGVTLINA---IKAIEKIEAQGDELTGINLVKKAMEEPLRQIANNAGIEGSVVVEKVKEAETGIGYNALTGVYESMIAAGIIDPAKVTRSAVQNAASISAMVLTTEAVVSELP 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 97/184 (52.72%), Postives = 126/184 (68.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K    ET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLRIEDA  AT AA+EEGIV GGG ALV++   V  + D +   DE+ G  I+ +AL  P   IA NA             SE   G++A  +KY NM++AG++DPAKVTR ALQNAASVA MVLTT+++V + P+ + SG
Sbjct:  348 KSQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALAATKAAVEEGIVAGGGTALVNVIPKVAKVLDTV-SGDEKTGVQIILRALEEPVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEKYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESVVADIPEKETSG 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHLTR (60 kDa chaperonin OS=Chlamydia trachomatis GN=groL PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A++ E P+
Sbjct:  346 CESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEALIAEIPE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHLTB (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groL PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A++ E P+
Sbjct:  346 CESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEALIAEIPE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A++ E P+
Sbjct:  346 CESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEALIAEIPE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHLT2 (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groL PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.603e-44
Identity = 92/183 (50.27%), Postives = 127/183 (69.40%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C + K+   ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A++ E P+
Sbjct:  346 CESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEALIAEIPE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_METVS (60 kDa chaperonin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=groL PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.124e-43
Identity = 94/177 (53.11%), Postives = 127/177 (71.75%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            T S Y+ + L ER+AKLSGGVAVIKVG+ATETEL+++KLRIEDA NAT AAIEEGIV GGG  L+ +   + + +      +ER+G +IV+KAL AP   IA NA            ++E   G++A  ++Y +M+++G+IDPAKVTR ALQN+ASVA +VLTT+AI+V+KPK + S
Sbjct:  354 TTSEYEKDSLKERLAKLSGGVAVIKVGSATETELKEKKLRIEDALNATKAAIEEGIVSGGGTVLIEILKEMESFE---LSGEERIGVNIVKKALTAPLKQIAENAGLEGSIVVEKVKNAESGIGFDAAKEEYVDMIKSGIIDPAKVTRSALQNSASVAALVLTTEAIIVDKPKKEES 527          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_THEAB6.587e-4450.7860 kDa chaperonin OS=Thermosipho africanus (strain... [more]
CH60_PHATR6.587e-4450.2760 kDa chaperonin, chloroplastic OS=Phaeodactylum ... [more]
CH60_CHLMU6.587e-4450.2760 kDa chaperonin OS=Chlamydia muridarum GN=groL P... [more]
CH60_SYNWW8.603e-4455.0660 kDa chaperonin OS=Syntrophomonas wolfei subsp. ... [more]
CH60_CLOTH8.603e-4452.7260 kDa chaperonin OS=Clostridium thermocellum (str... [more]
CH60_CHLTR8.603e-4450.2760 kDa chaperonin OS=Chlamydia trachomatis GN=groL... [more]
CH60_CHLTB8.603e-4450.2760 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLTA8.603e-4450.2760 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLT28.603e-4450.2760 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_METVS1.124e-4353.1160 kDa chaperonin OS=Methanococcus vannielii (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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