BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:377..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GEOKA (60 kDa chaperonin OS=Geobacillus kaustophilus GN=groL PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.124e-43
Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRS 612
            ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ + V AI+    + DE  G  IV +A+  P   IA NA            + +   G+NA T ++ +M++AG++DP KVTR ALQNAASVA MVLTT+A+V +KP+ +N G+ +
Sbjct:  353 ETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNIYNKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMVLTTEAVVADKPE-ENKGNNN 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.124e-43
Identity = 96/178 (53.93%), Postives = 126/178 (70.79%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 579
            K+   ET S +D EKL ER+AKLSGGVAVI+VGAATETEL++RKLRIEDA NAT AA+EEGIV GGG ALV++   +PA++  LE    DE+ G  I+++AL  P   IA NA             S+   GY+ + +KY NM++AG++DP KVTR ALQNAAS++ M+LTT++ VV+
Sbjct:  348 KKQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTALVNV---IPAVEALLEGSQGDEKTGIQIIRRALEEPLRQIAENAGLEGSVIVNKVMSSDKGIGYDVLNNKYVNMIEAGIVDPTKVTRSALQNAASISAMLLTTESAVVD 522          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STACT (60 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 100/182 (54.95%), Postives = 123/182 (67.58%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQN 597
            K    ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+ EGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA             +E   GYNA TD++ NML AG++DP KVTR ALQNAASVA M LTT+A+V + P+  N
Sbjct:  348 KSQIEETNSDFDREKLQERLAKLTGGVAVIKVGAASETELKERKLRIEDALNSTRAAVGEGIVAGGGTALVNVYKQVSEIE---AEGDVETGINIVLKALEAPVRQIAENAGLEGSIIVEKLKHAEPGIGYNAATDEWVNMLDAGIVDPTKVTRSALQNAASVAAMFLTTEAVVAKLPEENN 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 97/179 (54.19%), Postives = 122/179 (68.16%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K+   +T S +D EKL ER+AKL+GGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV +   +     K +  D + G +IV KAL AP   IA NA              +   GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+V + P+
Sbjct:  348 KKQIADTTSDFDREKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAVVADAPE 525          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 97/190 (51.05%), Postives = 132/190 (69.47%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRS 612
            K++  ET S +D EKL ER+AKL+GGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG ALV++   +PA+ D++E     DE  G  IV+ AL AP   IA NA              +   GYNA  DK+E+M+ AG++DP KVTR ALQNAASV+ ++LTT+A+V +KP+  ++  ++
Sbjct:  348 KKAIAETTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALVNV---IPAL-DEVEASATGDEATGIKIVKAALEAPVRQIAENAGLEGSVIVNQLKQEKPGVGYNAADDKFEDMVAAGIVDPTKVTRSALQNAASVSALLLTTEAVVADKPQPADAAPQA 533          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 101/190 (53.16%), Postives = 131/190 (68.95%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVV----EKPKAQNSGS 606
            ++   E+ S +D +KL ER+AKL+GGVAVI VGAATETEL++R+ RIEDA N+T AA++EG V GGG ALV   D   AIKD K E +DE+ G +IV +AL AP   IA NA              E   GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+V     +KP+A  +G+
Sbjct:  348 RKQIEESTSDFDKKKLQERLAKLTGGVAVIHVGAATETELKERRYRIEDALNSTRAAVDEGYVAGGGTALV---DVEKAIKDLKGETSDEQTGINIVLRALSAPVRQIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRTALQNAASIAALLLTTEAVVADIPEDKPEAPQAGA 534          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 93/184 (50.54%), Postives = 128/184 (69.57%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K+   +T S +D EKL ER+AKL+GGVAVI VGAATETE++++KLRIEDA NAT AA+EEGIVPGGG   V++   +  ++ +L   DER G DI+++AL AP   IA+NA            +S    G++A++++Y +M+ AG++DPAKVTR ALQNAAS+A M+LTT+ +V EK      G
Sbjct:  349 KKQIEDTTSDFDREKLQERLAKLAGGVAVINVGAATETEMKEKKLRIEDALNATRAAVEEGIVPGGGTVYVNVIPVLNGLEPEL--PDERTGVDIIKRALEAPLRQIANNAGVEGSIVVEKVKESPAGVGFDALSEQYTDMIGAGIVDPAKVTRIALQNAASIAAMILTTETLVAEKVDKDKKG 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLODI (60 kDa chaperonin OS=Clostridium difficile GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K    +T S +D EKL ER+AKL+GGVAV+KVGAATE EL++RKLRIEDA NAT AA+EEGIV GGG A V +   +PAI   +E  + + +LGA IV+KAL  P   IA NA            +SE  TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A   LTT+A V + P+ +++G
Sbjct:  348 KHQVEQTTSDFDREKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAG 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOD6 (60 kDa chaperonin OS=Clostridium difficile (strain 630) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K    +T S +D EKL ER+AKL+GGVAV+KVGAATE EL++RKLRIEDA NAT AA+EEGIV GGG A V +   +PAI   +E  + + +LGA IV+KAL  P   IA NA            +SE  TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A   LTT+A V + P+ +++G
Sbjct:  348 KHQVEQTTSDFDREKLMERLAKLAGGVAVVKVGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEAAVADLPEKEDAG 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOBM (60 kDa chaperonin OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=groL PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.467e-43
Identity = 97/179 (54.19%), Postives = 123/179 (68.72%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +T S +D EKL ER+AKL+GGVAVI+VGAATETEL++ KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA             SE   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A V + P+ +N+
Sbjct:  353 DTTSEFDKEKLQERLAKLAGGVAVIRVGAATETELKEEKLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKASEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENT 528          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_GEOKA1.124e-4353.3060 kDa chaperonin OS=Geobacillus kaustophilus GN=g... [more]
CH60_ALKMQ1.124e-4353.9360 kDa chaperonin OS=Alkaliphilus metalliredigens ... [more]
CH60_STACT1.467e-4354.9560 kDa chaperonin OS=Staphylococcus carnosus (stra... [more]
CH60_LACGA1.467e-4354.1960 kDa chaperonin OS=Lactobacillus gasseri (strain... [more]
CH60_LACF31.467e-4351.0560 kDa chaperonin OS=Lactobacillus fermentum (stra... [more]
CH60_LACAC1.467e-4353.1660 kDa chaperonin OS=Lactobacillus acidophilus GN=... [more]
CH60_DESAP1.467e-4350.5460 kDa chaperonin OS=Desulforudis audaxviator (str... [more]
CH60_CLODI1.467e-4352.1560 kDa chaperonin OS=Clostridium difficile GN=groL... [more]
CH60_CLOD61.467e-4352.1560 kDa chaperonin OS=Clostridium difficile (strain... [more]
CH60_CLOBM1.467e-4354.1960 kDa chaperonin OS=Clostridium botulinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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