BQ623020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.684e-11 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEA---GADPGAIA-----PFSFGSL---LGTQLLLMGWVESKR 256 S PGD+GFD LGLG+ PA L+ Y+E+ELIH RWAM AV GI V +A W +A A PG A P +G+L L + L + +VE +R Sbjct: 62 SAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR 157
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.873e-11 Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 2 Query: 2 SLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAG---ADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLA 394 SL GD GFDPL L +DP L+W+ +A++++GRWAM V G+ + + + A PG F+ S + +VE +RW D NP S + + ++++ E GYP G+ F+PL A Sbjct: 49 SLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQD------PIFKSYSLPPHECGYP-GRVFNPLNFA 175
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.359e-11 Identity = 48/146 (32.88%), Postives = 73/146 (50.00%), Query Frame = 2 Query: 5 LPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAMAAVVGI----FVGQAW-----SGIPWFEAGADPGAIAPFSFG----SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL 385 LPGD+GFDPLGL DP F+ KW E+I+GR+AM G +G+A + + WF+ G P A +++ +L ++ LMG+ E +R+ D+ P S ++ E +G+ YPGG F+PL Sbjct: 70 LPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPA-GTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFL----GLEKGLGGSGDPAYPGGPLFNPL 209 The following BLAST results are available for this feature:
BLAST of BQ623020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623020 ID=BQ623020; Name=BQ623020; organism=Citrus sinensis; type=EST; length=480bpback to top |