BQ623038

Overview
NameBQ623038
Unique NameBQ623038
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.075e-21
Identity = 60/144 (41.67%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  261 FQVNDSFT-ESRAIIRYYAEKYRSQGTELLGK-TTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKL-GLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKP-VSAWWD 680
            FQ  D +  ESRAI +Y   KY+++  +LL +    E  +V+ W EVE H Y+  I  +  + +    + G+  ++K+V +S EKL KVL+VYE RLS+S YLAGDF S ADL+H P+T Y +G       + D  P V AWW+
Sbjct:   58 FQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYAS--LFDSYPHVKAWWE 199          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20
Identity = 53/136 (38.97%), Postives = 84/136 (61.76%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKPVSAWWDDIST 692
            ESRAI +Y A ++  +G  LL  T ++  ++   +E+E+H + P   ++  + +     G++ D+ +V++ E KL KVLDVYE RL +SKYLA D F+L DL  +P  QYL+G   K+ +  +R  VSAW  DI++
Sbjct:   67 ESRAITQYIAHEFSDKGNNLLS-TGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITS 200          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 5.884e-20
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKPVSAWWDDIST 692
            ESRAI +Y A  Y  +G +L+   +++   +   +E+E+H + P   ++  + +     G++ D+ +V++ E KL KVLDVYE RL +SKYLA D F+L DL  +P  QYL+G   K+ +  +R  VSAW  DI++
Sbjct:   67 ESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITS 201          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGK-TTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFT-QYLVGPMEKEYMIRDRKPVSAWWDDIS 689
            ESRAI R+   K++    ELLG    E+  +V+ WLEVEAH   PP   + V+ +FA  LG   ++ +V ++ EKL KVL+VYE RL+   YLAGDF SLADLS  PFT  + +   E   ++     VSAWW  ++
Sbjct:   69 ESRAIARHVLRKHKP---ELLGGGRLEQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLS--PFTIMHCLMATEYAALVHALPHVSAWWQGLA 200          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGK-TTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKP-VSAWWDDI 686
            ESRAI +Y A K +    ELL +   EE  +V+ W+EVEA+ Y   +  +  Q+L +  LG + D+K+V ++ EKL KVL+VYE RL+K KYLAGDF SLADL+H+  T  L         + D  P V AWW  +
Sbjct:   67 ESRAICKYAARKNKP---ELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYAS--VLDAYPHVKAWWSGL 197          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYR-SQGTELLGKTT--EERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKL----GLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQY-LVGPMEKEYMIRDRKPVSAWWD 680
            ESRAI +Y   KY  + G +LLG+ +  EE  +V+ W EVEA  Y+P I  +  + +    +    G + ++ +V +S E+L  VL +YE RL KS+YLAGD  + ADL+H+PFT Y +  P  K  +  D   V AWW+
Sbjct:   67 ESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAK--VFDDYPKVKAWWE 204          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  261 FQVNDSF-TESRAIIRYYAEKYR-SQGTELLGKTT--EERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKL----GLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQY-LVGPMEKEYMIRDRKP-VSAWWD 680
            FQ  +S   +SRAI +Y   KY  + G +LLG+ +  EE  +V+ W EVEA  Y+P I  +  + +    +    G + ++ +V +S E+L  VL +YE RL KS+YLAGD  S ADL+H+PFT Y +  P  K +   D  P V AWW+
Sbjct:   58 FQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVF---DEYPKVKAWWE 204          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGKTTEERGLVEQWLEVEAHNYHPPIYEMTVQLLFASKL-GLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKPVSAWWDDI 686
            ESRAI +Y   K + +   L     +E  +V+ WLEVE++ Y P +  +  Q L    + G   DEK+V+++ EKL KVL+VYE RL+K KYLAGD+ S+ADLSH+  T  L G      ++     V AWW D+
Sbjct:   67 ESRAICKYVCRKNKPE--LLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCL-GATPHASVLDAYPHVKAWWTDL 198          
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 3
Query:  285 ESRAIIRYYAEKYRSQGTELLGKTTEER--GLVEQWLEVEAHNYHPPIYEMTVQLLFASKLGLSVDEKLVKKSEEKLGKVLDVYEERLSKSKYLAGDFFSLADLSHLPFTQYLVGPMEKEYMIRDRKP-VSAWW 677
            ESRAI RY   KY  +G+ LL   ++ +  GL EQ   VE  ++ PP   +  + +FA   GL  +E+L KK  + L   +D YE  LSK KYLAG+ F+LADL HLP+   +    + E  + D KP V AWW
Sbjct:   69 ESRAISRYLVAKY-GKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLPYGAMVA---QLEPTVLDSKPHVKAWW 198          
The following BLAST results are available for this feature:
BLAST of BQ623038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF1_ORYSJ4.075e-2141.67Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_ARATH1.549e-2038.97Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH5.884e-2038.24Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF4_MAIZE7.685e-2043.80Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_MAIZE1.004e-1944.12Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF1_WHEAT1.449e-1840.00Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT2.472e-1840.00Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF2_ORYSJ3.229e-1841.48Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF5_ARATH9.395e-1841.79Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00129 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00129 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623038 ID=BQ623038; Name=BQ623038; organism=Citrus sinensis; type=EST; length=706bp
TCCCATCCCATCGGGAAAAATTGTCATCCCTAGTTGCACGCCAATTTTGT
TTATATTTTAAATTATTATGTCAGAAAAATTCTATTCTATTATTGAAAAA
TCATATCCATATATAGTTATGAAAAGTAACTGCACAAACATTTTGGATAA
CTTCTTAAGATAAAAGAGGTAACAGAGTAAATCAAGCAAACTCTAGAGAT
TAAAAGGAAAATTTAAGCTTTCAAAATTACTAGTTTTGTATTCTAGTTAT
AAGTTTAACATTTCAAGTTAATGATTCATTTACAGAATCTCGAGCTATCA
TAAGGTACTACGCCGAAAAGTACAGGTCTCAAGGAACCGAACTTCTGGGA
AAAACAACTGAAGAAAGAGGCCTTGTGGAGCAATGGCTAGAGGTAGAGGC
ACACAACTATCACCCACCAATTTACGAGATGACTGTGCAACTTTTATTTG
CCTCCAAGTTGGGACTTTCTGTTGATGAAAAATTGGTAAAGAAGAGTGAA
GAAAAACTTGGAAAAGTTCTTGATGTTTACGAGGAGAGGCTCTCAAAGAG
CAAGTATTTGGCAGGAGATTTCTTCAGCCTGGCTGATCTGAGTCACCTTC
CATTTACTCAATACTTGGTTGGGCCGATGGAGAAGGAGTACATGATTAGA
GACAGAAAGCCTGTGAGTGCTTGGTGGGATGATATTAGCACAGGCCATCC
TGGAAG
back to top