BQ623055

Overview
NameBQ623055
Unique NameBQ623055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Match: M2K4_ARATH (Mitogen-activated protein kinase kinase 4 OS=Arabidopsis thaliana GN=MKK4 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.852e-15
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 2
Query:  374 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLDLH 664
            V H+ + + +ALKVI  N EE+ RRQI +E++I +    P VV C++ F  NG I ++LE+MD GS    L+      E+ LA +  Q+L GL  LH
Sbjct:   96 VIHRPSSRLYALKVIYGNHEETVRRQICREIEILRDVNHPNVVKCHEMFDQNGEIQVLLEFMDKGS----LEGAHVWKEQQLADLSRQILSGLAYLH 188          

HSP 2 Score: 31.187 bits (69), Expect = 4.852e-15
Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  670 KHIIHRDLKPSNLVI 714
            +HI+HRD+KPSNL+I
Sbjct:  190 RHIVHRDIKPSNLLI 204          
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Match: M2K5_ARATH (Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana GN=MKK5 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.066e-14
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 2
Query:  374 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLDLHHEN 673
            V H  T + FALKVI  N E++ RRQI +E++I +S   P VV C+  F  NG I ++LE+MD GS    L+      E+ LA +  Q+L GL  LH  +
Sbjct:   87 VIHTPTSRPFALKVIYGNHEDTVRRQICREIEILRSVDHPNVVKCHDMFDHNGEIQVLLEFMDQGS----LEGAHIWQEQELADLSRQILSGLAYLHRRH 182          

HSP 2 Score: 31.187 bits (69), Expect = 1.066e-14
Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = 1
Query:  670 KHIIHRDLKPSNLVI 714
            +HI+HRD+KPSNL+I
Sbjct:  181 RHIVHRDIKPSNLLI 195          
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Match: MEK2_CAEEL (Dual specificity mitogen-activated protein kinase kinase mek-2 OS=Caenorhabditis elegans GN=mek-2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.935e-14
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 2
Query:  380 HKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLDLHHE 670
            H+ TG   A K++ + ++ S R+QI +EL +      P++V  Y +F  N  ISI +EYMDG SL   LKKV  +PE+++  I   V++GL  L  E
Sbjct:   92 HRKTGVIMARKLVHLEIKPSVRQQIVKELAVLHKCNSPFIVGFYGAFVDNNDISICMEYMDGLSLDIVLKKVGRLPEKFVGRISVAVVRGLTYLKDE 188          

HSP 2 Score: 25.409 bits (54), Expect = 3.935e-14
Identity = 8/13 (61.54%), Postives = 13/13 (100.00%), Query Frame = 1
Query:  676 IIHRDLKPSNLVI 714
            I+HRD+KPSN+++
Sbjct:  191 ILHRDVKPSNMLV 203          
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Match: PBS2_YEAST (MAP kinase kinase PBS2 OS=Saccharomyces cerevisiae GN=PBS2 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 5.565e-12
Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 2
Query:  296 SDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSL---ADFLKKVKTIPEEYLAAICEQVLKGLLDLHHEN 673
            S +++ L++++               V HK T    A K +++ ++E+  RQI  EL++      PY+V  Y +F+  GA+ + +EYMDGGSL    D   ++  I E  LA I   V+ GL +L  ++
Sbjct:  351 SSSRITLDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAKFRQILMELEVLHKCNSPYIVDFYGAFFIEGAVYMCMEYMDGGSLDKIYDESSEIGGIDEPQLAFIANAVIHGLKELKEQH 479          

HSP 2 Score: 24.2534 bits (51), Expect = 5.565e-12
Identity = 8/13 (61.54%), Postives = 13/13 (100.00%), Query Frame = 1
Query:  673 HIIHRDLKPSNLV 711
            +IIHRD+KP+N++
Sbjct:  480 NIIHRDVKPTNIL 492          
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Match: BYR1_SCHPO (Protein kinase byr1 OS=Schizosaccharomyces pombe GN=byr1 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.719e-11
Identity = 33/99 (33.33%), Postives = 55/99 (55.56%), Query Frame = 2
Query:  371 LVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKVKTIPEEYLAAICEQVLKGLLDLHH 667
            LV+H+    F A K + +  +   ++QI +EL +    + PY+V  Y +F     IS+ +EYMD GSL   L++   IP + L  I   ++KGL+ L++
Sbjct:   82 LVKHR--NIFMARKTVYVGSDSKLQKQILRELGVLHHCRSPYIVGFYGAFQYKNNISLCMEYMDCGSLDAILREGGPIPLDILGKIINSMVKGLIYLYN 178          

HSP 2 Score: 31.187 bits (69), Expect = 2.719e-11
Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 1
Query:  673 HIIHRDLKPSNLVI 714
            HIIHRDLKPSN+V+
Sbjct:  181 HIIHRDLKPSNVVV 194          
The following BLAST results are available for this feature:
BLAST of BQ623055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
M2K4_ARATH4.852e-1541.24Mitogen-activated protein kinase kinase 4 OS=Arabi... [more]
M2K5_ARATH1.066e-1442.00Mitogen-activated protein kinase kinase 5 OS=Arabi... [more]
MEK2_CAEEL3.935e-1439.18Dual specificity mitogen-activated protein kinase ... [more]
PBS2_YEAST5.565e-1230.23MAP kinase kinase PBS2 OS=Saccharomyces cerevisiae... [more]
BYR1_SCHPO2.719e-1133.33Protein kinase byr1 OS=Schizosaccharomyces pombe G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00146 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00146 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623055 ID=BQ623055; Name=BQ623055; organism=Citrus sinensis; type=EST; length=715bp
ACACACTTTTCGCATTCTAAAACCCTAGAGACTTGATTTTTCATCATCAA
AGACTCTGCAACGACGACTTCGCTTCAGAAGAATCATAATAGACACAAGA
GCCCGATCATGAAGAAGGGAGGCTTAAACCCTAACGTGAAGCTCAAGCTC
TCTCTCCCTTCTTCTGAGGAAGCCTCTTTCACCAAATTTCTGACCAAGAG
CGGTACTGTTCATGGACGGTGATCTGCTCGTTAACAAAGACGGAGTTCGG
ATTGTCTCCCAGACTGAAACTGAAGCTCCACCGCCGATTAAGCCATCTGA
CAACCAGTTGAATTTGGAAGATATAGACACAATTAAAGTTGTTGGAAAGG
GAAGTGGTGGAATTGTGCAATTGGTGCAACACAAATGGACTGGCCAGTTT
TTTGCTTTAAAGGTTATTCAAATGAATGTTGAGGAGTCTGCACGAAGGCA
GATTGCTCAGGAGTTGAAAATTAATCAATCATCTCAATGTCCGTATGTTG
TCGTTTGTTATCAATCTTTCTACAGTAATGGTGCCATTTCAATTATTTTG
GAGTACATGGATGGTGGGTCTCTAGCTGATTTTCTGAAAAAAGTTAAAAC
TATTCCAGAAGAGTATCTGGCTGCCATCTGTGAGCAGGTGCTCAAGGGGT
TGTTGGATCTTCATCATGAAAACACATTATCCATAGGGATTTAAAGCCTT
CTAATTTGGTGATAA
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