BQ623056

Overview
NameBQ623056
Unique NameBQ623056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623056_ssr384 microsatellite BQ623056_ssr384:384..395. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11
Identity = 46/154 (29.87%), Postives = 72/154 (46.75%), Query Frame = 2
Query:  110 AEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL--------KFSTGGLETSAFALSS--GVGAWNAVVFEIVMT--FGLVYTGYATAVDP 535
            AEFF     VF G GS +  +   + G     G +  ++A    +         ISGGH NPAV+ G  V G +     I YW+AQ+LG++ A  +L         FS GGL ++ +   S  G      ++ EI++T  F ++  G  +++ P
Sbjct:    7 AEFFGTFWLVFGGCGSAILAAAFPELGI----GFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAP 156          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.466e-11
Identity = 41/139 (29.50%), Postives = 71/139 (51.08%), Query Frame = 2
Query:   95 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVV-ACLLLKFSTGGL--ETSAFALSSGVGAWNAVVFEIVMTFGL 502
            L+A  AEF + +IFVF G  S + +             ++  ++A   A+         +SGGH+NPA+T    VG  I+ +R++ Y +AQL+G++  A +L   + G      +  +L++      AVV E+++TF L
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKWPSALPT-------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQL 142          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 43/160 (26.88%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   71 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYS----KLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPK 538
            A+I  P+ L+  ++E  +  + VF   G+   Y     +++  G +   GL+         + V +    +ISG H+NPAVT       H  +++   YW AQ  G++ A  +L+     +E       +G   W+A+V EIV+TF +++   A A D +
Sbjct:   43 ADIFPPNLLKKVISEVVATFLLVFVTCGAASIYGEDMKRISQLGQSVVGGLI---------VTVMIYATGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVLYPIEVLGTTTPTG-PHWHALVIEIVVTFNMMFVTCAVATDSR 192          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 48/176 (27.27%), Postives = 84/176 (47.73%), Query Frame = 2
Query:   32 EN*KMPGIAIGNPA--EIGQPDALRAAVAEFFSMVIFVFAGQG----SGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGA-WNAVVFEIVMTFGLVYTGYATAVDPK 538
            +N  MP +  G  A  +   P  L+  V+E  +  + VF   G    SG   S+++  G +   GL+   + +A           +ISG H+NPAVT    V  H  +++   YW AQ  G++ A  +LK     ++      ++ VG  W+++V E+++TF +++   A A D +
Sbjct:   25 QNGTMPTMYYGEKAIADFFPPHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIHPVD--VIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR 189          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 42/147 (28.57%), Postives = 72/147 (48.98%), Query Frame = 2
Query:   95 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVGAWNAVVFEIVMTFGLVYTGYAT 523
            L+A  AEF + +IFVF G GS + +             ++  ++A   A+         +SGGH+NPA+T    VG  I+ +R+  Y  AQL+G++    +L +    L      +  AL++      A+V E+++TF L    +A+
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKWPSALPT-------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL-YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFAS 149          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_DUGDU (Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.139e-11
Identity = 42/104 (40.38%), Postives = 57/104 (54.81%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSA-SIAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            RA  +EF + ++FVF G GS + +          P  L S   IA AF L +   V A  +ISG H+NPAVT    VG H++F+R+  Y  AQLLG+V    +L
Sbjct:    6 RAVFSEFLATLLFVFFGLGSALNW----------PQALPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAAIL 99          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 44/156 (28.21%), Postives = 72/156 (46.15%), Query Frame = 2
Query:   71 AEIGQPDALRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVDPK 538
            A+I  P   +  ++E  +  + VF   G+   Y +  DN   +  G    S+A    + V +    +ISG H+NPAVT       H  +++   YW AQ  G++ A  +LK     +        SG   W+A+  EIV+TF +++   A A D +
Sbjct:   46 ADIFPPHLGKKVISEVVATFLLVFVTCGAASIYGE--DNARISQLG---QSVAGGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSG-PHWHALAIEIVVTFNMMFVTCAVATDSR 195          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 48/146 (32.88%), Postives = 70/146 (47.95%), Query Frame = 2
Query:   95 LRAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVGAWNAVVFEIVMTFGLVYTGYATAVD 532
            L+  +AEF +    +FAG G+     K    GA T  G+  A  A   A+  AV    ++SG H+NPAVT G  V G   + R+  Y +AQ   +  A ++L+   GG      A   G     ++V E V+TF L++   A A D
Sbjct:   56 LQMLLAEFLATFFLMFAGLGAITVEEK---KGAVTFPGVAVAWGAAVMAMVYAVG---HVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLRLMFGGRHAPVPATLPGGAHAQSLVIEFVITFYLMFVIMAVATD 195          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_ERIEU (Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            RA   EF + ++FVF G GS + + +   +       ++  ++A   A+   V +  +ISG H+NPAVT    VG HI+F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFTEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQMLGHISGAHINPAVTVACLVGCHISFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Match: AQP2_ELEMA (Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.324e-11
Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 2
Query:   98 RAAVAEFFSMVIFVFAGQGSGMAYSKLTDNGATTPAGLVSASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITFVRSILYWIAQLLGSVVACLLL 400
            RA  +EF + ++FVF G GS + + +   +       ++  ++A   A+   V    +ISG H+NPAVT    VG H++F+R+  Y  AQLLG+V    LL
Sbjct:    6 RAVFSEFLATLLFVFFGLGSALNWPQALPS-------VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTVACLVGCHVSFLRATFYLAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of BQ623056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AQPZ_BRUA25.466e-1129.87Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP5_PIG5.466e-1129.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
NIP22_ORYSJ7.139e-1126.88Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP21_ORYSJ7.139e-1127.27Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
AQP5_HUMAN7.139e-1128.57Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP2_DUGDU7.139e-1140.38Aquaporin-2 (Fragment) OS=Dugong dugon GN=AQP2 PE=... [more]
NIP23_MAIZE9.324e-1128.21Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]
NIP14_ORYSJ9.324e-1132.88Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
AQP2_ERIEU9.324e-1136.63Aquaporin-2 (Fragment) OS=Erinaceus europaeus GN=A... [more]
AQP2_ELEMA9.324e-1135.64Aquaporin-2 (Fragment) OS=Elephas maximus GN=AQP2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00147 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00147 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623056 ID=BQ623056; Name=BQ623056; organism=Citrus sinensis; type=EST; length=642bp
AGAGCTCGAAGCTAAAACTAAAACTTGCCAAGAAAATTAAAAAATGCCCG
GAATTGCTATCGGAAACCCGGCTGAGATCGGCCAGCCCGATGCCCTTAGG
GCGGCTGTCGCTGAGTTTTTCTCCATGGTCATTTTTGTTTTTGCCGGCCA
AGGGTCTGGCATGGCTTACAGCAAGCTCACGGACAATGGAGCAACAACAC
CAGCAGGTCTAGTGTCAGCATCAATAGCTCATGCATTTGCCCTCTTCGTG
GCAGTTTCTGTTGGCGCCAACATCTCCGGTGGACACGTGAACCCCGCTGT
TACTTTCGGTGCCTTTGTTGGCGGCCACATTACATTTGTCAGGAGTATTT
TGTACTGGATTGCCCAGTTACTCGGATCTGTTGTTGCTTGCTTGCTTCTC
AAGTTCTCCACTGGTGGATTGGAAACATCTGCTTTTGCCCTGTCATCTGG
AGTTGGTGCATGGAATGCAGTTGTGTTTGAGATTGTGATGACCTTTGGAC
TGGTCTACACGGGGTATGCCACAGCTGTTGACCCAAAGAGGGGAAACATT
GGCATCATTGCACCAATTGCAATTGGGTTATTGGTGGGGCCCACATCTTG
GCTGGGGGGGCCTTTGATGGGGCATCGATGACCCCTGAGTTT
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