BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA1_ACEAT (V-type proton ATPase catalytic subunit A isoform 1 OS=Acetabularia acetabulum PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.004e-115
Identity = 203/238 (85.29%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRTTLVANTSNMPVAAREASIYTGIT++EYFRDMGYN +MMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYER+G+V C+G PER GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  ALE FYE+FD DF+ +R  AREVLQ+ED+LNEIVQLVGKDALAE DKI LETA+ L+EDYL QN+FT YDK+CPFYKSV MMR
Sbjct:  296 IMKRTTLVANTSNMPVAAREASIYTGITLSEYFRDMGYNFAMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERSGRVACIGSPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYLNALEPFYEKFDSDFVTLRQVAREVLQKEDELNEIVQLVGKDALAESDKIILETARFLKEDYLQQNSFTKYDKYCPFYKSVGMMR 533          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CYACA (V-type proton ATPase catalytic subunit A OS=Cyanidium caldarium PE=3 SV=1)

HSP 1 Score: 408.683 bits (1049), Expect = 1.603e-113
Identity = 199/238 (83.61%), Postives = 218/238 (91.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EY+RDMG N+SMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKV CLG P R GS+TIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  ALE +YE+  P+F+N + KARE+LQ EDDL EIVQLVGKD+LAE DKITLE AK++RED+LAQN+FT YD+FCPFYKSV M+R
Sbjct:  298 IMKRTLLVANTSNMPVAAREASIYTGITVSEYYRDMGLNISMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVSCLGSPNRQGSITIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMKALEPYYEERFPEFLNYQQKAREILQTEDDLMEIVQLVGKDSLAENDKITLEVAKMIREDFLAQNSFTEYDRFCPFYKSVLMLR 535          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CAEBR (V-type proton ATPase catalytic subunit A OS=Caenorhabditis briggsae GN=vha-13 PE=3 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 3.949e-112
Identity = 193/238 (81.09%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRL EMPADSGYPAYLAARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  ALE FYE+  P+F+++RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AK++++D+L QN +TPYD+FCPFYK+V M++
Sbjct:  294 IMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALEEFYEKNYPEFVHLRTKCKEILQEEEDLSEIVQLVGKASLAESDKITLEVAKIIKDDFLQQNGYTPYDRFCPFYKTVGMLK 531          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA2_DROME (V-type proton ATPase catalytic subunit A isoform 2 OS=Drosophila melanogaster GN=Vha68-2 PE=1 SV=2)

HSP 1 Score: 400.979 bits (1029), Expect = 3.343e-111
Identity = 193/238 (81.09%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  AL+ FY++  P+F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M+R
Sbjct:  302 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNFPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLR 539          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_ANOGA (V-type proton ATPase catalytic subunit A OS=Anopheles gambiae GN=Vha68-2 PE=3 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 4.366e-111
Identity = 193/238 (81.09%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  ALE FY++  P+F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M++
Sbjct:  302 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALEDFYDKNFPEFVPMRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSAYDRFCPFYKTVGMLK 539          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CHICK (V-type proton ATPase catalytic subunit A OS=Gallus gallus GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.702e-111
Identity = 193/237 (81.43%), Postives = 218/237 (91.98%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY+ AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVTIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYTRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGML 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_PONAB (V-type proton ATPase catalytic subunit A OS=Pongo abelii GN=ATP6V1A PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.270e-110
Identity = 193/237 (81.43%), Postives = 217/237 (91.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYDKFCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDKFCPFYKTVGML 541          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CAEEL (V-type proton ATPase catalytic subunit A OS=Caenorhabditis elegans GN=vha-13 PE=1 SV=3)

HSP 1 Score: 399.053 bits (1024), Expect = 1.270e-110
Identity = 190/238 (79.83%), Postives = 218/238 (91.60%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT+AEYFRDMG NV+MMADSTSRWAEALREISGRL EMPADSGYPAYLAARLASFYERAG+VKCLG PER GSVTIVGAVSPPGGDF+DPVTSATL IVQVFWGLDKKLAQRKHFPS+NWLISYS+Y  ALE FYE+  P+F+++RTK +E+LQ E+DL+EIVQLVGK +LAE DK+TLE AK++++D+L QN +T YD+FCPFYK+V M++
Sbjct:  294 IMKRTALVANTSNMPVAAREASIYTGITLAEYFRDMGLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNYPEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQNGYTKYDRFCPFYKTVGMLK 531          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_MANSE (V-type proton ATPase catalytic subunit A OS=Manduca sexta GN=VHAA PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.659e-110
Identity = 191/238 (80.25%), Postives = 219/238 (92.02%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG P+R GSV+IVGAVSPPGGDFSDPVT+ATL IVQVFWGLDKKLAQRKHFPS+NWLISYSKY  AL+ FYE+  P+F+ +RTK +E+LQ E+DL+EIVQLVGK +LAE DKITLE AKLL++D+L QN+++ YD+FCPFYK+V M++
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPDREGSVSIVGAVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYEKNYPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLK 542          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_MOUSE (V-type proton ATPase catalytic subunit A OS=Mus musculus GN=Atp6v1a PE=1 SV=2)

HSP 1 Score: 397.897 bits (1021), Expect = 2.830e-110
Identity = 192/237 (81.01%), Postives = 217/237 (91.56%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +MKRT LVANTSNMPVAAREASIYTGIT++EYFRDMGY+VSMMADSTSRWAEALREISGRLAEMPADSGYPAYL ARLASFYERAG+VKCLG PER GSV+IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPSVNWLISYSKY  AL+ +Y++   +F+ +RTKA+E+LQ E+DL EIVQLVGK +LAE DKITLE AKL+++D+L QN +TPYD+FCPFYK+V M+
Sbjct:  305 IMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGML 541          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA1_ACEAT1.004e-11585.29V-type proton ATPase catalytic subunit A isoform 1... [more]
VATA_CYACA1.603e-11383.61V-type proton ATPase catalytic subunit A OS=Cyanid... [more]
VATA_CAEBR3.949e-11281.09V-type proton ATPase catalytic subunit A OS=Caenor... [more]
VATA2_DROME3.343e-11181.09V-type proton ATPase catalytic subunit A isoform 2... [more]
VATA_ANOGA4.366e-11181.09V-type proton ATPase catalytic subunit A OS=Anophe... [more]
VATA_CHICK5.702e-11181.43V-type proton ATPase catalytic subunit A OS=Gallus... [more]
VATA_PONAB1.270e-11081.43V-type proton ATPase catalytic subunit A OS=Pongo ... [more]
VATA_CAEEL1.270e-11079.83V-type proton ATPase catalytic subunit A OS=Caenor... [more]
VATA_MANSE1.659e-11080.25V-type proton ATPase catalytic subunit A OS=Manduc... [more]
VATA_MOUSE2.830e-11081.01V-type proton ATPase catalytic subunit A OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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