BQ623087

Overview
NameBQ623087
Unique NameBQ623087
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8171 contig Csv1_Contig8171:173..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.031e-81
Identity = 147/238 (61.76%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGIT+AEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+ + LG PER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRSQVLGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpA PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.031e-81
Identity = 147/238 (61.76%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGIT+AEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+ + LG PER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRSQVLGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRP4 (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpA PE=3 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 8.031e-81
Identity = 147/238 (61.76%), Postives = 187/238 (78.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGIT+AEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R+A +YERAG+ + LG PER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMQRTVLIANTSNMPVAAREASIYTGITMAEYFRDMGYSVAIMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRIAEYYERAGRSQVLGLPEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAML 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOBH (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=atpA PE=3 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 8.031e-81
Identity = 150/239 (62.76%), Postives = 181/239 (75.73%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY++++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAG V  +G  ER G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +R KA  +LQ E  L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++
Sbjct:  284 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSIALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAAEFYERAGNVVSIGSEEREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLK 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2)

HSP 1 Score: 300.056 bits (767), Expect = 8.031e-81
Identity = 150/239 (62.76%), Postives = 181/239 (75.73%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITI EYFRDMGY++++MADSTSRWAEALRE+SGRL EMP D GYPAYL +R A FYERAG V  +G  ER G++T++GAVSPPGGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y   +  +  E    D+  +R KA  +LQ E  L EIV+LVG DAL+E D++ LE AK LREDYL QNAF   D +    K   M++
Sbjct:  284 LMKRTVLIANTSNMPVAAREASIYTGITIGEYFRDMGYSIALMADSTSRWAEALREMSGRLEEMPGDEGYPAYLGSRAAEFYERAGNVVSIGSEEREGALTVIGAVSPPGGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLK 522          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.049e-80
Identity = 146/239 (61.09%), Postives = 186/239 (77.82%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +M RT L+ANTSNMPVAAREASIY GITIAEY+RDMGY+V ++ADSTSRWAEALREI+GRL EMPA+ GYP+YLA+RLA FYERAG+VK LG PER+GSVT+VGAVSPPGGDFS+PVTS T   ++VFW LD KLA  +H+P++NWL+SYS Y     + ++E  D  +   R +A ++L RE +L EIV+LVG + L E DK+ LETA+L+++ +L QNAF P D F    K   +++
Sbjct:  294 LMDRTVLIANTSNMPVAAREASIYVGITIAEYYRDMGYDVLLVADSTSRWAEALREIAGRLEEMPAEEGYPSYLASRLAEFYERAGRVKALGSPERSGSVTVVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMSYSAYVDLVTQWWHENVDKRWREYRDEAMDILLRESELQEIVRLVGTEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLK 532          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_METBA (V-type ATP synthase alpha chain OS=Methanosarcina barkeri GN=atpA PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.370e-80
Identity = 147/231 (63.64%), Postives = 182/231 (78.79%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPF 691
            +M+RT L+ANTSNMPVAAREAS+YTGITIAEY+RDMG +VS+MADSTSRWAEA+REIS RL EMP + GYPAYL+ARLA FYERAG  + L G   TGS+T++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  +L   F +   PD++ +R +A E+LQ E +L EIVQLVG DAL +  ++ LE  ++LRE +L QNAF P D + PF
Sbjct:  281 LMERTVLIANTSNMPVAAREASVYTGITIAEYYRDMGLDVSLMADSTSRWAEAMREISSRLEEMPGEEGYPAYLSARLAEFYERAGVAESLCG--ETGSITVIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPF 509          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_THEPX (V-type ATP synthase alpha chain OS=Thermoanaerobacter sp. (strain X514) GN=atpA PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.789e-80
Identity = 147/239 (61.51%), Postives = 183/239 (76.57%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP + GYPAYLA RLA FYERAG+V CLG   R G++T+VGAVSPPGGD S+PVT ATL +V+VFW LD +LA  +HFP++NWL SYS YS  +E +  +    D+  +R++A  +LQ E  L EIV+LVG D L+  D++ LE A+ +RED+L QNAF   D +    K   M++
Sbjct:  285 LMKRTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGEEGYPAYLARRLAEFYERAGRVICLGSDNREGALTVVGAVSPPGGDLSEPVTQATLRVVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDVLSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_CLOTH (V-type ATP synthase alpha chain OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpA PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.789e-80
Identity = 147/239 (61.51%), Postives = 182/239 (76.15%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMR 715
            +MKRT L+ANTS+MPVAAREASIYTG+TIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL EMP + GYPAYL +RLA FYERAG+V CLG   R G++T +GAVSPPGGD S+PVT ATL I++VFWGLD  LA R+HFP++NWL SYS Y   +  +  E    D+  +R+    +LQ E +L EIV+LVG DAL+  D++TLE AK +REDYL QNAF   D +    K   M++
Sbjct:  285 LMKRTVLIANTSDMPVAAREASIYTGMTIAEYFRDMGYSVALMADSTSRWAEALREMSGRLEEMPGEEGYPAYLGSRLAQFYERAGRVVCLGSDGREGALTAIGAVSPPGGDLSEPVTQATLRIIKVFWGLDSSLAYRRHFPAINWLQSYSLYLDIIGKWISENISRDWETLRSDTMRILQEEAELEEIVRLVGVDALSPSDRLTLEAAKSIREDYLHQNAFHEVDTYTSLNKQYRMLK 523          
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Match: VATA_STRPZ (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpA PE=3 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.337e-80
Identity = 147/238 (61.76%), Postives = 185/238 (77.73%), Query Frame = 2
Query:    2 VMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMM 712
            +M+RT L+ANTSNMPVAAREASIYTGITIAEYFRDMGY+V++MADSTSRWAEALRE+SGRL E+P D GYPAYL +R+A +YERAG+V+ LG  ER G++T +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++ +  A+ +REDYL QNAF   D F  F K   M+
Sbjct:  286 IMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEIPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAML 523          
The following BLAST results are available for this feature:
BLAST of BQ623087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
VATA_STRPN8.031e-8161.76V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPJ8.031e-8161.76V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP48.031e-8161.76V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_CLOBH8.031e-8162.76V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOB18.031e-8162.76V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_AERPE1.049e-8061.09V-type ATP synthase alpha chain OS=Aeropyrum perni... [more]
VATA_METBA1.370e-8063.64V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA_THEPX1.789e-8061.51V-type ATP synthase alpha chain OS=Thermoanaerobac... [more]
VATA_CLOTH1.789e-8061.51V-type ATP synthase alpha chain OS=Clostridium the... [more]
VATA_STRPZ2.337e-8061.76V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00178 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00178 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623087 ID=BQ623087; Name=BQ623087; organism=Citrus sinensis; type=EST; length=719bp
TGTCATGAAGCGTACAACACTTGTGGCCAACACTTCTAACATGCCTGTGG
CTGCTCGTGAGGCTTCGATTTATACAGGAATCACCATAGCTGAATATTTC
AGAGATATGGGGTACAATGTTAGCATGATGGCAGATTCAACTTCTCGTTG
GGCAGAAGCGTTGCGTGAAATTTCAGGACGGCTGGCAGAAATGCCTGCAG
ATAGTGGATATCCTGCTTACCTGGCTGCACGTTTGGCCTCATTTTATGAA
CGTGCTGGGAAAGTTAAATGTCTTGGTGGACCAGAACGTACTGGTAGTGT
CACAATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCTG
TAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAAG
AAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTTA
CTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCGG
ATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGAT
GACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAGG
AGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTTG
CTCAAAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTCT
GTTTGGATGATGCGTACAT
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