BQ623088

Overview
NameBQ623088
Unique NameBQ623088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAAN (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain N315) GN=copA PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAAM (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=copA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAA9 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain JH9) GN=copA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAA2 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain JH1) GN=copA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAA1 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=copA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_ECO57 (Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7 GN=copA PE=3 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 68/199 (34.17%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 GTTHPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEK-VTLIHLEDRPRPGVSDVIAELK--DHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            G++HP+ RA++D +    LP V+  R      RGL     G+    EG   L   LG+     +L   +    K  EA  ++   +G     L+V+ K V L+ + D  R   SD +A L+    A  R++MLTGD+ ++A  +A   GI+EV   + P+ K   +K    + G  + MVG+GINDAPALA A VGI +
Sbjct:  559 GSSHPLARAILDKASDMQLPQVNGFRTL----RGL-----GVSGEAEGHALL---LGN----QALLNDQQVDTKAIEADISAQASQGATPVLLAVDGKAVALLAVRDPLR---SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGVLPDGKAEAIKRLQSE-GRQVAMVGDGINDAPALAQADVGIAM 737          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAAW (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MW2) GN=copA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +     E         G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISDDLTYYER-------DGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAAS (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MSSA476) GN=copA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +     E         G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLTLTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISDDLTYYER-------DGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: CADA_STAAR (Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 55/196 (28.06%), Postives = 99/196 (50.51%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLP--SVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGRGFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A++  +   ++    V ++ F    GRG+   ++G      G   L   L   DF      S +   K+K   N     +G     +  ++ +  +I + D  R    +VI +L      + +MLTGD++ +A+ +   VG++++   L P+DKL+++K    +  G + M+G+G+NDAPALAA+TVGI +
Sbjct:  454 HPLASAIMKKAEQDNITYSDVRVEDFTSITGRGIQGNIDGTTYYI-GSPRLFKELNVSDF------SLEFENKVKVLQN-----QGKTAMIIGTDQTILGVIAVADEVRETSKNVIQKLHQLGIKQTIMLTGDNQGTAEAIGAHVGVSDIQSELMPQDKLDYIKKMKAE-HGNVAMIGDGVNDAPALAASTVGIAM 636          
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Match: COPA_STAAE (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Newman) GN=copA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.145e-14
Identity = 61/195 (31.28%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   10 HPIGRAVVDHSIGKDLPSVSIDRFEYFPGRGLTATVNGIESGTEGGKELKASLGSVDFITSLCKSEDESRKIKEAVNASSYGR-GFVHAALSVNEKVT-LIHLEDRPRPGVSDVIAELKDHARLRVMMLTGDHESSAQRVANAVGINEVYCSLKPEDKLNHVKSTSRDMGGGLIMVGEGINDAPALAAATVGIVL 588
            HP+  A+V+++  K L       F+  PG G+ AT++       G ++L A     D   SL K   +        + + Y R G     ++VN  +T +I + D  +    D I +L D   + V MLTGD++++AQ +A  VGI+ V   + PE+K   + +  +  G  + MVG+G+NDAPAL  A +GI +
Sbjct:  529 HPLAEAIVNYAKEKQLILTETTTFKAVPGHGIEATIDHHHI-LVGNRKLMA-----DNDISLPKHISD--------DLTHYERDGKTAMLIAVNYSLTGIIAVADTVKDHAKDAIKQLHDMG-IEVAMLTGDNKNTAQAIAKQVGIDTVIADILPEEKAAQI-AKLQQQGKKVAMVGDGVNDAPALVKADIGIAI 707          
The following BLAST results are available for this feature:
BLAST of BQ623088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
COPA_STAAN1.258e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAM1.258e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA91.258e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA21.258e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA11.258e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_ECO571.258e-1434.17Copper-exporting P-type ATPase A OS=Escherichia co... [more]
COPA_STAAW1.642e-1430.93Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAS1.642e-1430.93Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
CADA_STAAR1.642e-1428.06Probable cadmium-transporting ATPase OS=Staphyloco... [more]
COPA_STAAE2.145e-1431.28Copper-exporting P-type ATPase A OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00179 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00179 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623088 ID=BQ623088; Name=BQ623088; organism=Citrus sinensis; type=EST; length=608bp
GGTACTACCCACCCTATTGGAAGAGCTGTGGTTGACCATAGTATAGGCAA
GGACCTTCCTTCTGTATCAATTGACCGTTTTGAGTATTTTCCTGGTCGAG
GTCTCACAGCAACTGTAAATGGCATTGAGTCAGGAACTGAAGGGGGTAAA
GAATTGAAAGCATCTCTGGGTTCTGTAGATTTTATAACTTCTCTCTGTAA
ATCTGAAGATGAATCAAGAAAGATCAAGGAAGCTGTGAATGCTTCTTCTT
ATGGAAGGGGCTTTGTTCATGCTGCTCTTTCTGTTAATGAAAAGGTAACA
TTGATTCACCTCGAGGATAGGCCTCGCCCAGGAGTTTCAGATGTTATAGC
AGAATTAAAAGATCATGCAAGATTACGTGTGATGATGTTAACTGGTGACC
ATGAGTCTAGTGCGCAGAGAGTAGCAAATGCTGTTGGCATCAATGAAGTT
TACTGCAGCCTGAAGCCTGAGGATAAGCTCAATCATGTGAAGAGTACCTC
CAGGGATATGGGAGGAGGTTTGATCATGGTTGGTGAAGGCATTAATGATG
CGCCAGCACTCGCAGCTGCAACTGTGGGAATTGTTCTTGCTCAACGGGCT
AGTGCAAC
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