BQ623093

Overview
NameBQ623093
Unique NameBQ623093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54
Identity = 100/158 (63.29%), Postives = 116/158 (73.42%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSK 628
            +V+FD+ + G+PAGRIVM LF    P+TAENFRALCTGEKG G+SGKPLHYK S+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG+V+ GMDVV  +E  G  +G    K
Sbjct:    5 RVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKK 162          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54
Identity = 100/155 (64.52%), Postives = 118/155 (76.13%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 619
            KVYFD+ I G+PAGRIVM L+    P+TAENFRALCTGEKG+G +GKPLH+KGS FHR+IP+FM Q            ESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+ G+DVV  +E  G  +G P
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKP 159          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 102/155 (65.81%), Postives = 114/155 (73.55%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 619
            KV+FDV I  +PAGR+ M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHRIIP FM+Q            ESIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFI TV T WLDG HVVFG+V  GM VV K+E  G ++G P
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAP 177          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 5.324e-54
Identity = 102/161 (63.35%), Postives = 116/161 (72.05%), Query Frame = 2
Query:  146 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSK 628
            +  KVYFD+ +  K AGRIVM L+   VP+TAENFRALCTGE+GIGKSGKPLHYKGS FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSM NAG +TNGSQFFI T  TSWLDG+HVVFG+V+ GMDVV  +E  G  +G    K
Sbjct:    2 VNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKK 162          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.643e-53
Identity = 111/185 (60.00%), Postives = 128/185 (69.19%), Query Frame = 2
Query:   38 MASTNLLPLTDAMGLLSCWPPFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 592
            MAS + L L  A+ +  C+     + A K       ITNKVYFD+E  GKP GRIVMGL+GK VPKTAENFRAL TG+   G+      Y+GS+FHRII +FM+Q            +SIYG KFPDENFKLKHTGPG+LSMANAG DTNGSQFFI TV T+WLD RHVVFG VL GMDVVY +E
Sbjct:   11 MASKSFLSLLVALFVAICFVLSPGVDAAKGPV----ITNKVYFDIEHGGKPLGRIVMGLYGKTVPKTAENFRALATGKNSDGED-LGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAME 190          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.643e-53
Identity = 99/153 (64.71%), Postives = 115/153 (75.16%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG 613
            KVYFD+ + GK AGRIVM L+    P+TAENFRALCTGE+GIGK GKPLHYKGS+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAG +TNGSQFFI T  TSWLDG+HVVFG+V+ G++VV  +E  G  +G
Sbjct:    6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSG 158          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53
Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 2
Query:  152 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPK 622
            +KV+FD+ I    AGRIVM LF +  PKTAENFRALCTGEKG+GK+GKPLH+KGS FHR+I  FM Q            ESIYGEKF DENF+LKH  PGLLSMANAGP+TNGSQFF+T V   WLDG+HVVFG+V+ G++++ ++EA G Q+G  K
Sbjct:    3 SKVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTK 159          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.004e-52
Identity = 100/158 (63.29%), Postives = 113/158 (71.52%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSK 628
            KV+FD+ I    AGR+VM LF    P+TA NFRALCTGE GIGK+GK LHYKGS FHRIIP FM Q            ESIYG KF DENFKLKHTGPG+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFGKV+ G +VV  +E  G   G P  +
Sbjct:    5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSER 162          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.713e-52
Identity = 102/165 (61.82%), Postives = 119/165 (72.12%), Query Frame = 2
Query:  125 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 619
            S  ++K+  ++V+FD+ I GK AGRIV  L+   VPKTAENFRALCTGEKG+GK GKPLHYKGSTFHR+I  FM+Q            ESIYG KF DENF+LKH  P LLSMANAGP TNGSQFF+TTV T  LDG+HVVFG+VLSG  VV ++E    Q   P
Sbjct:    3 STDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKP 167          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.922e-52
Identity = 100/153 (65.36%), Postives = 113/153 (73.86%), Query Frame = 2
Query:  155 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG 613
            +V+FD+ I G  AG++VM L+   VPKTAENFRALCTGEKGIGKSGKPL YKGS+FHR+I +FM Q            ESIYG KF DENFKLKH G G LSMANAG +TNGSQFFI    T WLDG+HVVFG V  GMDVV K+EA G Q+G
Sbjct:   13 RVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSG 165          
The following BLAST results are available for this feature:
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYPH_CATRO2.390e-5463.29Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CP18C_ARATH2.390e-5464.52Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CYP1_CAEEL3.121e-5465.81Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CYPH_BRANA5.324e-5463.35Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
PPIB_CRYNE2.643e-5360.00Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CP19A_ARATH2.643e-5364.71Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPI2_SYNY33.451e-5362.42Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CP19C_ARATH1.004e-5263.29Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPID_NEUCR1.713e-5261.8241 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIA_DICDI2.922e-5265.36Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00184 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00184 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623093 ID=BQ623093; Name=BQ623093; organism=Citrus sinensis; type=EST; length=646bp
GTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAA
ATTTGCTTCCACTCACAGATGCTATGGGCCTGTTGTCCTGTTGGCCACCT
TTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCAC
AAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTA
TTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTC
CGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACT
CCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTC
AAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTAT
GGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGG
GCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCT
TCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTT
GGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGG
GAGGCAGAATGGCACTCCGAAAAGCAAGTCGTCATTGCAGACAGCG
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