BQ623093

Overview
NameBQ623093
Unique NameBQ623093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:36..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.123e-11
Identity = 58/172 (33.72%), Postives = 73/172 (42.44%), Query Frame = 2
Query:  194 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXE----------------SIYGEKFPDENF---KLKHTGPGLLSMAN--------------AGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS------GMDVVYKVE 592
            G + + LF +AVPKTAENF ALC              Y  + FHR+IP FM+Q            +                SIY     ++      L+H   G+LSMA+               GP  NGSQFFIT      LDG   VFGKVL+      G DV+ K+E
Sbjct:   10 GDLKVELFCEAVPKTAENFIALCAAGA----------YNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLE 171          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 46/141 (32.62%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  194 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENF--------KLKHTGPGLLSMANAGPDTNGSQFFITT-VTTSWLDGRHVVFGKVLSGMDVVYKV 589
            G +V+ L+ +  P+   NF  LC          K  +Y     H +   F++Q            ESI+G+ + D+          ++KH   G +SM N G D +GSQF ITT     +LDG H VFG+V  GMD+V K+
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKI 139          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11
Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  194 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENF--------KLKHTGPGLLSMANAGPDTNGSQFFITT-VTTSWLDGRHVVFGKVLSGMDVVYKV 589
            G +V+ L+ +  P+   NF  LC          K  +Y     H +   F++Q            ESI+G+ + D+          ++KH   G +SM N G D +GSQF ITT     +LDG H VFG+V  GMD++ K+
Sbjct:   10 GDVVIDLYTEERPRACLNFLKLC----------KIKYYNYCLIHNVQRDFIIQTGDPTGTGRGG-ESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKI 139          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11
Identity = 49/125 (39.20%), Postives = 62/125 (49.60%), Query Frame = 2
Query:  191 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 562
            +G I + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  308 SGDINLELQTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPSGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 421          
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Match: PPIL2_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspergillus fumigatus GN=cyp8 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 7.280e-11
Identity = 48/124 (38.71%), Postives = 61/124 (49.19%), Query Frame = 2
Query:  194 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL 562
            G + + L  +  PK   NF  L   +KG        +YK  TFHR I  FM+Q            ESI+G+ F DE    LKH   G LSMAN G +TN SQFFI       L+ +H +FG V+
Sbjct:  322 GDVNLELHTEYAPKAVWNFIKLA--KKG--------YYKDVTFHRNIKGFMIQGGDPTGTGRGG-ESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNNKHTIFGHVI 434          
The following BLAST results are available for this feature:
BLAST of BQ623093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIL3_EMENI1.123e-1133.72Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPIL4_MOUSE4.268e-1132.62Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIL4_HUMAN5.574e-1131.91Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL2_ASPOR7.280e-1139.20Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]
PPIL2_ASPFU7.280e-1138.71Peptidyl-prolyl cis-trans isomerase-like 2 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00184 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00184 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623093 ID=BQ623093; Name=BQ623093; organism=Citrus sinensis; type=EST; length=646bp
GTGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGACAA
ATTTGCTTCCACTCACAGATGCTATGGGCCTGTTGTCCTGTTGGCCACCT
TTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCAC
AAACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTA
TTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTC
CGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACT
CCACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTC
AAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTAT
GGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGG
GCTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCT
TCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTT
GGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGG
GAGGCAGAATGGCACTCCGAAAAGCAAGTCGTCATTGCAGACAGCG
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