BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.130e-38
Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_GLEJA (Ferredoxin OS=Gleichenia japonica PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.699e-38
Identity = 73/95 (76.84%), Postives = 79/95 (83.16%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A +KVK +TP GE  I  PDD FILDA EEAGLDLPYSCRAGACSSCTGK++ G VDQSEQSFLDDDQM EGFVLTC AYP  D+TIETH EE+L
Sbjct:    1 AIFKVKFLTPDGERTIEVPDDKFILDAGEEAGLDLPYSCRAGACSSCTGKLLDGRVDQSEQSFLDDDQMAEGFVLTCVAYPAGDITIETHAEEKL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 6.699e-38
Identity = 75/97 (77.32%), Postives = 85/97 (87.63%), Query Frame = 3
Query:  147 MATYKVKLI-TPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI   G    I+CPDDT+ILDAAEEAGLDLPYSCRAGACS+C GK+V+GT+DQS+QSFLDDDQ+  G+VLTC AYPTSDVTIETHKEE+L
Sbjct:    1 MATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.750e-38
Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKVKL+TP G++E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV  G VDQS+ SFLDD+Q+GEG+VLTC AYP SD TIETHKEEEL
Sbjct:    1 ATYKVKLVTPSGQQEFQCPDDVYILDQAEEVGIDLPYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSDGTIETHKEEEL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_CHLFU (Ferredoxin OS=Chlorella fusca PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 8.750e-38
Identity = 75/93 (80.65%), Postives = 80/93 (86.02%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YKV L TP GEE I CP+DT+ILDAAEEAGLDLPYSCRAGACSSC GKV SG VDQS+QSFLDD QMG+GFVLTC AYPTSDVTI TH+E  L
Sbjct:    1 YKVTLKTPSGEETIECPEDTYILDAAEEAGLDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSDVTILTHQEAAL 93          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37
Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQM +GFVLTC AYP SDV IETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEELTG 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37
Identity = 73/96 (76.04%), Postives = 82/96 (85.42%), Query Frame = 3
Query:  150 ATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKVKL+TP G+  E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKV +G VDQS+ SFLDDDQ+GEG+VLTC AYPTSDV IETHKEEEL
Sbjct:    1 ATYKVKLVTPSGQPLEFECPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEEEL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.143e-37
Identity = 73/95 (76.84%), Postives = 81/95 (85.26%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKV L+TP G + I C DD +ILDAAEE G+DLPYSCRAGACSSC GKV SG+VDQS+QSFL+D QM EG+VLTC AYPT DVTIETHKEEEL
Sbjct:    1 ATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SAMNI (Ferredoxin OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.492e-37
Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A+YKVKLITP G +E  CPDD +IL+ AEE G+D+PYSCRAG+CSSC GK+V+G+VDQS+QSFLDD+Q+ EG+VLTC AYP SDVTIETHKEEEL
Sbjct:    1 ASYKVKLITPDGPQEFECPDDVYILEHAEELGIDIPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEEL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.546e-37
Identity = 72/95 (75.79%), Postives = 80/95 (84.21%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A+YKVKLITP G  E +CPDD +ILD AEE G DLPYSCRAG+CSSC GKV +G VDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEEEL
Sbjct:    1 ASYKVKLITPEGAVEFDCPDDVYILDQAEEMGHDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER2_HYONI5.130e-3874.23Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_GLEJA6.699e-3876.84Ferredoxin OS=Gleichenia japonica PE=1 SV=1[more]
FER1_APHFL6.699e-3877.32Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2[more]
FER_COLES8.750e-3874.74Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FER_CHLFU8.750e-3880.65Ferredoxin OS=Chlorella fusca PE=1 SV=1[more]
FER_SCOJA1.143e-3774.23Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FERB_ALOMA1.143e-3776.04Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER2_SPIOL1.143e-3776.84Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER_SAMNI1.492e-3773.68Ferredoxin OS=Sambucus nigra PE=1 SV=1[more]
FER_TOBAC2.546e-3775.79Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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