BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_SYNE7 (Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF PE=3 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 4.801e-36
Identity = 74/98 (75.51%), Postives = 82/98 (83.67%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L+    G    I+  DDT+ILDAAEE G+DLPYSCRAGACS+C GKVVSGTVDQS+QSFLDDDQ+  GFVLTC AYPTSDVTIETHKEE+L
Sbjct:    1 MATYKVTLVNAAEGLNTTIDVADDTYILDAAEEQGIDLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_EUGVI (Ferredoxin OS=Euglena viridis PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36
Identity = 70/95 (73.68%), Postives = 79/95 (83.16%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATY VKLI P GE  I C +D +ILDAAE+AG+DLPYSCRAGACSSCTG V  GTVDQS+QSFLDDDQM +GF LTC  YPTS+ TIETHKE++L
Sbjct:    1 ATYSVKLINPDGEVTIECGEDQYILDAAEDAGIDLPYSCRAGACSSCTGIVKEGTVDQSDQSFLDDDQMAKGFCLTCTTYPTSNCTIETHKEDDL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_SYNP2 (Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petF PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LITP GE   + PDD +ILD+A +AG DLP SCRAGACS+C GK+VSGTVDQSEQSFLDDDQ+  G+VLTC AYP SDVTIET+KEEEL
Sbjct:    1 MATYKVTLITPDGEVSYDAPDDEYILDSAGDAGYDLPASCRAGACSTCAGKIVSGTVDQSEQSFLDDDQIEAGYVLTCIAYPQSDVTIETNKEEEL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.397e-35
Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI    G  + I   DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ SGTVDQS+QSFLDDDQ+  G+VLTC AYPTSD TIETHKEEEL
Sbjct:    1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.383e-35
Identity = 71/98 (72.45%), Postives = 83/98 (84.69%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI+   G  E I+C DDT+ILDAAEEAGLDLPYSCRAGACS+C GK+ SG++DQS+QSFLDDDQ+  G+VLTC AYPTSD TI+TH+EE L
Sbjct:    1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEEGL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 3.112e-35
Identity = 72/98 (73.47%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI    G  + I  PDD +ILDAAEEAG+DLPYSCRAGACS+C GK++SGTVDQS+QSFLDDDQ+  G+VLTC AYPTSD  IETHKEEEL
Sbjct:    1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_PHYES (Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.064e-35
Identity = 66/96 (68.75%), Postives = 81/96 (84.38%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 437
            A+YKV  +TP G + I CP DT++LDAAE+ GLDLPYSCRAGACSSC GKV +G+V+Q + SFLD++QM  G+VLTC AYPTSDVTIETHKEE+L+
Sbjct:    2 ASYKVTFVTPSGTKTITCPADTYVLDAAEDTGLDLPYSCRAGACSSCAGKVTAGSVNQEDGSFLDEEQMEAGWVLTCVAYPTSDVTIETHKEEDLS 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SPIPL (Ferredoxin OS=Spirulina platensis PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35
Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI    G  E I+C DDT+ILDAAEEAGLDLPYSCRAGACS+C G + SGT+DQS+QSFLDDDQ+  G+VLTC AYPTSD TI+TH+EE L
Sbjct:    1 MATYKVTLINEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGTITSGTIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEEGL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.054e-35
Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A+YKVKL+TP G +E  CPDD +ILD AEE G+ LPYSCRAG+CSSC GKV +G V+QS+ SFLDDDQ+ EG+VLTC AY  SDVTIETHKEEEL
Sbjct:    1 ASYKVKLVTPEGTQEFECPDDVYILDHAEEEGIVLPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSDVTIETHKEEEL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.054e-35
Identity = 66/95 (69.47%), Postives = 79/95 (83.16%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A+YKV  +TP G   I CP DT++LDAAEE+GLDLPYSCRAGACSSC GKV +G V+Q + SFL+++QM  G+VLTC AYPTSDVTIETHKEE+L
Sbjct:    2 ASYKVTFVTPSGTNTITCPADTYVLDAAEESGLDLPYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSDVTIETHKEEDL 96          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER1_SYNE74.801e-3675.51Ferredoxin-1 OS=Synechococcus elongatus (strain PC... [more]
FER_EUGVI6.270e-3673.68Ferredoxin OS=Euglena viridis PE=1 SV=1[more]
FER1_SYNP26.270e-3675.00Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 272... [more]
FER_CHLFR1.397e-3575.51Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]
FER_SPIMA2.383e-3572.45Ferredoxin OS=Spirulina maxima PE=1 SV=2[more]
FER_MASLA3.112e-3573.47Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1... [more]
FER2_PHYES4.064e-3568.75Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_SPIPL6.933e-3572.45Ferredoxin OS=Spirulina platensis PE=1 SV=2[more]
FER_MEDSA9.054e-3571.58Ferredoxin OS=Medicago sativa PE=1 SV=1[more]
FER2_PHYAM9.054e-3569.47Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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