BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PANGI (Ferredoxin OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.183e-34
Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YKVKL+TP GE+E  CPDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG VD S+ SFL+DD M  G+VLTC AY  SDV IETHKEEE+
Sbjct:    4 YKVKLLTPEGEKEFECPDDVYILDNAEEIGIDLPYSCRAGSCSSCAGKVVSGKVDNSDNSFLNDDNMDAGYVLTCHAYANSDVVIETHKEEEV 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.017e-34
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 3
Query:  150 ATYKVKLITPGGEEEINCPDDTFILD-AAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            ATYKV LITP G++E   PDD +ILD AAEE G DLPYSCRAG+CSSC GKV +G+VDQS+ S+LDDDQM  G+VLTC AYPTSDVTIETHKEEEL
Sbjct:    1 ATYKVTLITPEGKQEFEVPDDVYILDHAAEEVG-DLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTIETHKEEEL 95          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MAT+KV LI    G + EI  PDD +ILDAAEE G DLP+SCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_MARPO (Ferredoxin OS=Marchantia polymorpha PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34
Identity = 68/94 (72.34%), Postives = 79/94 (84.04%), Query Frame = 3
Query:  153 TYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            T+KV L TP G+  I+  DD +ILDAAEEAGL LPYSCRAGACSSC GKV +G VDQS++SFLDDDQM EG+VLTC AYPTSD+TI+TH+EE L
Sbjct:    1 TFKVTLNTPTGQSVIDVEDDEYILDAAEEAGLSLPYSCRAGACSSCAGKVTAGEVDQSDESFLDDDQMDEGYVLTCIAYPTSDLTIDTHQEEAL 94          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MAT+KV LI    G + EI  PDD +ILDAAEE G DLP+SCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_ANASO (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.634e-34
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MAT+KV LI    G + EI  PDD +ILDAAEE G DLP+SCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDV I+THKEE+L
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_DUNSA (Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 68/93 (73.12%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YKV L TP G++ I    D +ILDAAEEAGLDLPYSCRAGACSSC GKV +GT+DQS+QSFLDDDQ G GFVLTC AY TSD TI TH+EE L
Sbjct:    2 YKVTLKTPSGDQTIEVSPDAYILDAAEEAGLDLPYSCRAGACSSCAGKVEAGTIDQSDQSFLDDDQQGRGFVLTCVAYATSDCTISTHQEESL 94          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_CYACA (Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 69/98 (70.41%), Postives = 82/98 (83.67%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            M +YKVKL     G + EINCP+D +ILDAAEE G+DLPYSCRAGACS+C GK++SGTVDQS+QSFLDD+Q+ EGFVLTC AYPTS+ TI TH+EE L
Sbjct:    1 MTSYKVKLTNEKEGIDVEINCPNDQYILDAAEEQGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDEQIKEGFVLTCVAYPTSNCTILTHQEEAL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_ANAVT (Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petF1 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.441e-34
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MAT+KV LI    G    I+ PDD +ILDAAEE G DLP+SCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+  G+VLTC AYPTSDVTI+THKEE+L
Sbjct:    1 MATFKVTLINEAEGTSNTIDVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_THAWE (Ferredoxin OS=Thalassiosira weissflogii GN=petF PE=3 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 71/100 (71.00%), Postives = 80/100 (80.00%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEIN----CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV LI+   E +IN    C DD F+LDAAEEAG+DLPYSCRAGACS+C GKV  GT+DQSEQ+FLDDDQMG GFVLTC AYP SD TI  H+E+EL
Sbjct:    1 MATYKVTLISE--EHDINTTIDCNDDVFVLDAAEEAGIDLPYSCRAGACSTCAGKVTEGTIDQSEQTFLDDDQMGAGFVLTCIAYPKSDCTILVHQEDEL 98          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_PANGI1.183e-3472.04Ferredoxin OS=Panax ginseng PE=1 SV=1[more]
FER_ARCLA2.017e-3475.00Ferredoxin OS=Arctium lappa PE=1 SV=1[more]
FER_NOSMU2.634e-3471.43Ferredoxin OS=Nostoc muscorum PE=1 SV=2[more]
FER_MARPO2.634e-3472.34Ferredoxin OS=Marchantia polymorpha PE=1 SV=1[more]
FER1_ANASP2.634e-3471.43Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=... [more]
FER1_ANASO2.634e-3471.43Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=... [more]
FER2_DUNSA3.441e-3473.12Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1[more]
FER1_CYACA3.441e-3470.41Ferredoxin OS=Cyanidium caldarium GN=petF PE=3 SV=... [more]
FER1_ANAVT3.441e-3471.43Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 2... [more]
FER_THAWE5.869e-3471.00Ferredoxin OS=Thalassiosira weissflogii GN=petF PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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