BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SYNLI (Ferredoxin OS=Synechococcus lividus PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L+ P GE  I+ P+D +ILD AEE GLDLP+SCRAGACS+C GK++ G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I TH+EEEL
Sbjct:    1 MATYKVTLVRPDGETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEEL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_NOSMU (Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 70/98 (71.43%), Postives = 82/98 (83.67%), Query Frame = 3
Query:  147 MAT-YKVKLITPGGEEE-INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MAT YKV L+   G E  I+ PDD +ILD AE+ GLDLPYSCRAGACS+C GK+VSGTVDQS+QSFLDDDQ+ +G+VLTC AYPTSD+ IETHKEE+L
Sbjct:    1 MATVYKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_DUNSA (Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.708e-33
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 3
Query:  153 TYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            +Y V L TP GE+++    D++ILDAAEEAG+DLPYSCRAG+CSSC GKV SGTVDQS+QSFLDDDQM  GFVLTC AY TSD TI TH+EE L
Sbjct:    1 SYMVTLKTPSGEQKVEVSPDSYILDAAEEAGVDLPYSCRAGSCSSCAGKVESGTVDQSDQSFLDDDQMDSGFVLTCVAYATSDCTIVTHQEENL 94          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_CYAPA (Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 SV=3)

HSP 1 Score: 141.739 bits (356), Expect = 2.230e-33
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA YKV+LI    G +  I CPDD +ILDAAEE G+DLPYSCRAGACS+C GKVV GTVDQS+QSFLDD Q+  G+VLTC AYP+SD T++TH+EE L
Sbjct:    1 MAVYKVRLICEEQGLDTTIECPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKVVEGTVDQSDQSFLDDAQLAAGYVLTCVAYPSSDCTVKTHQEESL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_BUMFI (Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 3
Query:  153 TYKVKLITPGGEEEIN----CPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            TY V L+    E+ IN    CPDD FILDAAEE G++LPYSCRAGACS+C GKV+SGT+DQSEQSFLDDDQMG GF+LTC AYPTSD  ++TH E++L
Sbjct:    2 TYSVTLVNE--EKNINAVIKCPDDQFILDAAEEQGIELPYSCRAGACSTCAGKVLSGTIDQSEQSFLDDDQMGAGFLLTCVAYPTSDCKVQTHAEDDL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33
Identity = 69/108 (63.89%), Postives = 83/108 (76.85%), Query Frame = 3
Query:  114 LKANRGGRVVAMATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            LK ++   V AMA YKVKL+ P GEE E + PDD +ILDAAE AG++LPYSCRAGACS+C GK+ SG+VDQS+ SFLDD Q  EG+VLTC +YP SD  I THKE +L
Sbjct:   44 LKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDL 151          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33
Identity = 71/112 (63.39%), Postives = 85/112 (75.89%), Query Frame = 3
Query:  108 FGLK--ANRGGRVVAMATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            FGLK  AN GG  ++ A YKVKL+ P G+E E    DD +ILDAAEEAG+DLPYSCRAGACS+C G++VSG VDQS+ SFL+D  + +G+VLTC AYP SD  I THKE EL
Sbjct:   44 FGLKCSANSGGATMS-AVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_EQUTE (Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.107e-32
Identity = 69/93 (74.19%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YK  L TP GE  ++ P+ T ILDAAEEAG DLP+SCRAGACSSC GKVVSG+VDQSE SFLDD QM EGFVLTC A P SD+ IETHKEEEL
Sbjct:    2 YKTVLKTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_BRYMA (Ferredoxin OS=Bryopsis maxima PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.446e-32
Identity = 64/98 (65.31%), Postives = 80/98 (81.63%), Query Frame = 3
Query:  150 ATYKVKL-ITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 440
            A+YKV L +  G E  I+C +D+FILD AEE G+D+P+SCR+G+CS+C GK+  GTVDQSEQ+FLDDDQM EG+VLTC AYPTSD TI TH+EEE+ G
Sbjct:    1 ASYKVTLKLDDGSEAVIDCDEDSFILDVAEEEGIDIPFSCRSGSCSTCAGKIEGGTVDQSEQTFLDDDQMEEGYVLTCVAYPTSDCTILTHQEEEMIG 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER3_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.446e-32
Identity = 66/97 (68.04%), Postives = 78/97 (80.41%), Query Frame = 3
Query:  150 ATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A+YK+ L+    G +E I CPDD +ILDAAEE GLDLPYSCRAGACS+C GK++ G VDQS+QSFLDDDQ+  GFVLTC AYPTS+ TI TH+EE L
Sbjct:    1 ASYKIHLVNKDQGIDETIECPDDQYILDAAEEQGLDLPYSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQVKAGFVLTCVAYPTSNATILTHQEESL 97          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_SYNLI1.708e-3368.75Ferredoxin OS=Synechococcus lividus PE=1 SV=2[more]
FER1_NOSMU1.708e-3371.43Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2[more]
FER1_DUNSA1.708e-3371.28Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1[more]
FER1_CYAPA2.230e-3368.37Ferredoxin-1 OS=Cyanophora paradoxa GN=petF PE=1 S... [more]
FER_BUMFI3.804e-3368.37Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1[more]
FER3_MAIZE3.804e-3363.89Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE... [more]
FER3_ARATH8.475e-3363.39Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER1_EQUTE1.107e-3274.19Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1[more]
FER_BRYMA1.446e-3265.31Ferredoxin OS=Bryopsis maxima PE=1 SV=1[more]
FER3_CYACA1.446e-3268.04Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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