BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PERBI (Ferredoxin OS=Peridinium bipes PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32
Identity = 61/93 (65.59%), Postives = 77/93 (82.80%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            +KV L TP G++   CP D++ILD AEE GL+LPYSCRAG+CSSC GKV++G++DQS+Q+FLDDDQ G+G+ LTC  YPTSDVTI+TH E EL
Sbjct:    1 FKVTLDTPDGKKSFECPGDSYILDKAEEEGLELPYSCRAGSCSSCAGKVLTGSIDQSDQAFLDDDQGGDGYCLTCVTYPTSDVTIKTHCESEL 93          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_APHSA (Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32
Identity = 64/96 (66.67%), Postives = 73/96 (76.04%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA+YKV L TP G+  I  PDD +ILD AEE GLDLPYSCRAGACS+C GK+VSG     +QSFLDDDQ+  G++LTC AYPT D  IETHKEE L
Sbjct:    1 MASYKVTLKTPDGDNVITVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQIQAGYILTCVAYPTGDCVIETHKEEAL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_EQUAR (Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32
Identity = 68/93 (73.12%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YK  L TP GE  ++ P+ T ILDAAEEAG DLP+SCRAGACSSC GKVVSG+VD+SE SFLDD QM EGFVLTC A P SD+ IETHKEEEL
Sbjct:    2 YKTVLKTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32
Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 3
Query:  108 FGLKANRGGRVVAMATYKVKLIT--PGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            FGLK+   GR+  MATYKV  +    G E    C D+ + LDAAE AG+DLPYSCRAGACSSC G + +G VDQS+QSFLDD Q+ +GFVLTC AYP SD  I TH+EE +
Sbjct:   35 FGLKSRSMGRLTCMATYKVTFLDGETGAENVXECSDEEYXLDAAERAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.206e-32
Identity = 68/96 (70.83%), Postives = 74/96 (77.08%), Query Frame = 3
Query:  150 ATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A YKVKLI P GEE E    DD FILDAAEEAG+DLPYSCRAGACS+C G++V G VDQSE SFL+DD   +GFVLTC AYP SD  I THKE EL
Sbjct:    2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.174e-32
Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 3
Query:  147 MATYKVKLI--TPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            M ++KV LI  T G    I  PDD +ILDAAEE G+DLPYSCRAGACS+C GK+ +GTVDQS+QSFLDDDQ+  G+VLTC AYPTSD TI TH+EE+L
Sbjct:    1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEEDL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 9.370e-32
Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = 3
Query:  150 ATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A YKVKLI P G+E E + PDD +ILDAAEEAG+DLPYSCRAGACS+C GK+  G VDQS+ SFL+D    +G+VLTC AYP SD+ I THKEEEL
Sbjct:    2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEEL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEE-INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L+ P G E  I+ P+D +ILD AEE GLDLP+SCRAGACS+C GK++ G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEE-INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L+ P G E  I+ P+D +ILD AEE GLDLP+SCRAGACS+C GK++ G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEE-INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L+ P G E  I+ P+D +ILD AEE GLDLP+SCRAGACS+C GK++ G VDQS+QSFLDDDQ+ +GFVLTC AYP SD  I T++EEEL
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_PERBI1.888e-3265.59Ferredoxin OS=Peridinium bipes PE=1 SV=1[more]
FER_APHSA2.466e-3266.67Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2[more]
FER1_EQUAR2.466e-3273.12Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1[more]
FER_PHYPA3.220e-3259.46Ferredoxin, chloroplastic OS=Physcomitrella patens... [more]
FER2_RAPSA4.206e-3270.83Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=... [more]
FER1_PLEBO7.174e-3267.35Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 ... [more]
FER1_RAPSA9.370e-3267.71Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=... [more]
FER_THEVL2.087e-3167.01Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=pe... [more]
FER_THEEB2.087e-3167.01Ferredoxin-1 OS=Thermosynechococcus elongatus (str... [more]
FER_SYNEN2.087e-3167.01Ferredoxin-1 OS=Synechococcus elongatus naegeli GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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