BQ623095

Overview
NameBQ623095
Unique NameBQ623095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length558
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1721 contig Csv1_Contig1721:101..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_ODOSI (Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31
Identity = 63/98 (64.29%), Postives = 78/98 (79.59%), Query Frame = 3
Query:  147 MATYKVKLITPGGEEE--INCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MATYKV L++   + +  I+C DD F+LDAAEE G++LPYSCRAGACS+C GKV  G +DQSEQ+FLDDDQ+G GFVLTC AYP SD T+  H+E+EL
Sbjct:    1 MATYKVTLLSEEHDIDATIDCNDDVFLLDAAEEQGIELPYSCRAGACSTCAGKVTEGDIDQSEQTFLDDDQVGAGFVLTCIAYPKSDCTVLVHQEDEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.726e-31
Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 3
Query:  156 YKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            YK++L+    G +  INCP D +ILDAAEE G+DLPYSCRAGACS+C GK+V G+VDQS+QSFLD++Q+  GF+LTC AYPTSD  I+TH+EE L
Sbjct:    2 YKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSDCVIQTHQEEAL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 65/98 (66.33%), Postives = 75/98 (76.53%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA+YKV LI    G  E I  PDD +ILD AEE G+DLPYSCRAGACS+C GK+  G +DQS+QSFLDDDQ+  G+VLTC AYP SD TI TH+EEEL
Sbjct:    1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_RHOPL (Ferredoxin OS=Rhodymenia palmata PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.561e-31
Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 3
Query:  156 YKVKLITPGGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            Y V L TPGG EEI   + T++LD+AE+ G+DLPYSCRAGACS+C G V  GTVDQS+QSFLDDDQ+ + FVLTC AYPTSD  I+TH+EE+L
Sbjct:    4 YTVTLSTPGGVEEIEGDETTYVLDSAEDQGIDLPYSCRAGACSTCAGIVELGTVDQSDQSFLDDDQLNDSFVLTCVAYPTSDCQIKTHQEEKL 96          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.073e-31
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA YK+ L+    G +   NC +DT+ILDAAEE G++LPYSCRAGACS+C GKV  GTVDQ++QSFLDDDQ+  G+VLTC AYP+SD TI TH E+EL
Sbjct:    1 MADYKIHLLCEEEGIDVTFNCAEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSDCTISTHVEQEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER2_NOSMU (Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.353e-30
Identity = 64/99 (64.65%), Postives = 78/99 (78.79%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELA 437
            MATYKV+L     G +E I  PDD +ILDAAEEAGLDLP+SCR+G+CSSC G +  GTVDQS+Q+FLDDDQ+  G VLTC AYPTS+  IETH+E+ +A
Sbjct:    1 MATYKVRLFNAAEGLDETIEVPDDEYILDAAEEAGLDLPFSCRSGSCSSCNGILKKGTVDQSDQNFLDDDQIAAGNVLTCVAYPTSNCEIETHREDAIA 99          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PORPU (Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.014e-30
Identity = 62/98 (63.27%), Postives = 79/98 (80.61%), Query Frame = 3
Query:  147 MATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            MA YK+ L++   G +   +C +DT+ILDAAEEAG++LPYSCRAGACS+C GKV  G+VDQS+QSFLDD+Q+ +G+VLTC AYP SD TI TH E+EL
Sbjct:    1 MADYKIHLLSEDEGIDVTFDCSEDTYILDAAEEAGIELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQEL 98          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 62/97 (63.92%), Postives = 77/97 (79.38%), Query Frame = 3
Query:  150 ATYKVKLITP--GGEEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            A YK+ L++   G +   +C +DT+ILDAAEE G++LPYSCRAGACS+C GKV  GTVDQS+QSFLDD+QM +G+VLTC AYP SD TI TH E+EL
Sbjct:    1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQEL 97          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.141e-30
Identity = 67/129 (51.94%), Postives = 86/129 (66.67%), Query Frame = 3
Query:   60 PTATSLKAMPNMGQAMFGLKANRGGRVVAMAT---YKVKLITPGG-EEEINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            P A +L    +  QA          R VA A    +KVKL+ P G E E   PDDT+IL+AAE AG++LP+SCRAG+CS+C G++ +G VDQSE SFLDD QM EG++LTC +YP +D  I THKEE+L
Sbjct:   26 PAANTLSFAGHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154          
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.321e-27
Identity = 64/131 (48.85%), Postives = 87/131 (66.41%), Query Frame = 3
Query:   51 RSKPTATSLKAMPNMGQAMFGLKANRG--GRVVAMATYKVKLITPGGEE-EINCPDDTFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 434
            R  P+   L    N     FGL ++RG  G+V A  + KVKLI+P GEE EI   +D  IL++AE AGL+LPYSCR+G C +C GK+VSG VDQS  SFL+++Q+ +G++LTC A P  D  + THK+ +L
Sbjct:   18 RISPSQAQLTTRLN-NTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147          
The following BLAST results are available for this feature:
BLAST of BQ623095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_ODOSI2.726e-3164.29Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2[more]
FER2_CYACA2.726e-3164.21Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER_SYNP43.561e-3166.33Ferredoxin OS=Synechococcus sp. (strain PCC 7418) ... [more]
FER_RHOPL3.561e-3166.67Ferredoxin OS=Rhodymenia palmata PE=1 SV=1[more]
FER_PORYE6.073e-3164.29Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER2_NOSMU1.353e-3064.65Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2[more]
FER_PORPU3.014e-3063.27Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2[more]
FER_PORUM5.141e-3063.92Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV... [more]
FER6_MAIZE5.141e-3051.94Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE... [more]
FER4_ARATH5.321e-2748.85Probable ferredoxin-4, chloroplastic OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00186 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00186 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623095 ID=BQ623095; Name=BQ623095; organism=Citrus sinensis; type=EST; length=558bp
CAACAACAATGGCCACCCTCTCAAGCGCCATGGTAAGCACCTCATTCATC
AGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACATGGGTCA
GGCTATGTTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAGCCATGG
CTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAAATCAAC
TGTCCTGATGACACGTTTATTCTTGATGCTGCTGAAGAAGCTGGGCTTGA
TCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTGGGAAAG
TTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGAT
CAAATGGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGA
TGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTG
CTCTTGATATCTCATTATTATCTTCTCTTTTATGTGGTGGGTTTTGTCTG
ATTATTTTAATGCTTTGAAAGGGATATTGGGTTACAAAAAAAAAAATAAA
GAAACTCG
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