BQ623109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_SYNP2 (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=cbbS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.722e-15 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 SD+ + +++ Y++ G+IP +EFE K HH WT+WKLP++ + A +VL EV E + EY ++R++GFDN +Q Q +SFI KP Sbjct: 20 SDQQIARQVQYMMDQGYIPGIEFE--KDPTPELHH----------WTLWKLPLFNASSAQEVLNEVRECRSEYSDCYIRVVGFDNIKQCQTVSFIVYKP 106
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.564e-13 Identity = 34/99 (34.34%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 +D + K++ Y++ G+IP +EF YWT+WKLP++G + +VL EV + +YP ++R++GFDN +Q Q +SFI KP Sbjct: 20 TDVQIEKQVQYILSQGYIPAVEFN------------EVSEPTELYWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.760e-13 Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFI 286 + + +++ Y++ GW P +E H P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q S + Sbjct: 31 DEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.949e-12 Identity = 28/99 (28.28%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 +D+ + +++ Y + +G+ P +EF G + WT+WKLP++G +VL E+ ++++P++++R++ FD+ RQVQ + F+ KP Sbjct: 19 NDQQIARQLQYALSNGYSPAIEFSFT------------GKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_HYDMR (Ribulose bisphosphate carboxylase small chain 2 OS=Hydrogenovibrio marinus GN=cbbS-2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.851e-12 Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 283 + + +I Y+I GW P LE H++P YW MWKLPM+G D VL E+ + + YP+ +R+IG+DN Q Q +F Sbjct: 26 DEIYDQIVYIINQGWTPALE------------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQGHNF 105
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.121e-11 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S E + K+I Y++ GW P +E H P YW MWKLPM+G TD +++ E+ ++ P+ +++IG+DN RQ Q + + +P Sbjct: 36 SAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 1.911e-11 Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQ 265 + + K++ Y++ GW P +E H P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN Q Sbjct: 31 DRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.258e-11 Identity = 33/98 (33.67%), Postives = 47/98 (47.96%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 301 E + K++ Y++ GW P +E H P YW MWKLPM+G TD +L E K +P VR+IG+DN Q Q + + + P Sbjct: 31 EKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 2 Query: 20 KEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 271 K++ YL+ GW P +E H P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q Sbjct: 35 KQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.486e-11 Identity = 34/83 (40.96%), Postives = 43/83 (51.81%), Query Frame = 2 Query: 23 EINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 271 ++ Y+I GW P +E H P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q Sbjct: 36 QVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQ 106 The following BLAST results are available for this feature:
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623109 ID=BQ623109; Name=BQ623109; organism=Citrus sinensis; type=EST; length=454bpback to top |