BQ623109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 7.447e-40 Identity = 68/101 (67.33%), Postives = 87/101 (86.14%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 ++ L KE++YL+R W+PCLEFELE G+VYRE+ +SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCI FIA++P G Sbjct: 77 TETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS_SILPR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Silene pratensis GN=RBCS PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.270e-39 Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+LLKEINYL+ GW+PCLEFE+ VYRE++KSPGYYDGRYWTMWKLPM+GCTDA+QV EV E + YP + VRIIGFDNKRQVQCISFIA KP Sbjct: 78 SEESLLKEINYLLIKGWVPCLEFEVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.659e-39 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+SFIA KP Sbjct: 83 SEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.659e-39 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+SFIA KP Sbjct: 79 SEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.659e-39 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+SFIA KP Sbjct: 80 SEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.659e-39 Identity = 66/99 (66.67%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 8 EALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 304 + L ++++YL+ + W+PCLEFE + G+VYREHH SPGYYDGRYWTMWKLPM+GCTD QVL E+ E +KEYP++F+RIIGFD+ RQVQC+SFIA KP G Sbjct: 81 DQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQCISFIA KP Sbjct: 80 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 178
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS3_FRIAG (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWKLPM+GCTDA QV+KE E +KEYP +F+R+IGFDN RQVQC+SFI KP Sbjct: 81 SVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS2_FRIAG (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S E+LLK+I YLIR+GW+PCLEF LE G+V R+++KSPGYYDGRYWTMWKLPM+GCTDA QV+KE E +KEYP +F+R+IGFDN RQVQC+SFI KP Sbjct: 81 SVESLLKQIEYLIRNGWVPCLEFSLE-GFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 2.167e-39 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 2 SDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFIAAKP 298 S+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQCISFIA KP Sbjct: 79 SEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCISFIAYKP 177 The following BLAST results are available for this feature:
BLAST of BQ623109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623109 ID=BQ623109; Name=BQ623109; organism=Citrus sinensis; type=EST; length=454bpback to top |