BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHOH_BOVIN (Rho-related GTP-binding protein RhoH OS=Bos taurus GN=RHOH PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27 Identity = 56/170 (32.94%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKK 602 + + ++ +TS TFP Y PTV++N +V++DG ++LGLWDTAG + + +RPLSY+ ADV L+ +S+ + S+ N+ KWI E+R P P+++V T+ D R+ + H + + +G+ L + + A Y+ECS+ + + V+ VF+ A++ + + +++ Sbjct: 17 KTSLLVRFTSETFPEAYKPTVYENTGVDVLMDGIQISLGLWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEVRSNLPCTPVLVVATQTDQRE----VGPHRASC-VNAIEGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRR 181
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND3_PIG (Rho-related GTP-binding protein RhoE OS=Sus scrofa GN=RND3 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.922e-27 Identity = 63/174 (36.21%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSS-KTQQNVKAVFD-AAIKVVLQPPKNTKKKK 602 R A + + + FP +YVPTVF+N++A+ +D + L LWDT+G Y+ +RPLSY +D L+ F + + ++V KKW E++ + P ++LVG K DLR D L + + P++ QG + K IGA YIECS+ +++ +V+ +F A + V + KN K+ K Sbjct: 36 RTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNK 209
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO3_ASHGO (GTP-binding protein RHO3 OS=Ashbya gossypii GN=RHO3 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.930e-27 Identity = 63/168 (37.50%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQF---LADHPGAVP------------ITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 +T FP Y PTVF+N+ ++ VD + L LWDTAGQE+++RLR LSY +L FS+ S+ S ENV KW+ E+ + GV ++LV K DLR ++ A PG++ I +G + K IGA Y+ECS+K + V F A + L Sbjct: 35 FTRGYFPKVYEPTVFENYIHDIFVDNQHITLSLWDTAGQEEFDRLRSLSYSDTHTIMLCFSVDSRDSLENVKNKWVSEIADHCEGVKLVLVALKCDLRSSDEYGNESAITPGSIQNQKYNGGGGNGLIPYDEGLAMAKQIGALRYLECSAKMNRGVNEAFTEAARCAL 202 HSP 2 Score: 26.1794 bits (56), Expect = 4.930e-27 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCMRHFLHQQHFP 133 K V +GDGA GKT + + + +FP Sbjct: 17 KIVILGDGACGKTSLLNVFTRGYFP 41
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO3_YEAST (GTP-binding protein RHO3 OS=Saccharomyces cerevisiae GN=RHO3 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 4.062e-26 Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK-----------------------QFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 +T FP Y PTVF+N+ ++ VD + L LWDTAGQE+++RLR LSY +L FS+ S+ S ENV KW+ E+ + GV ++LV K DLR+++ + G I+ +G + K IGA Y+ECS+K + V F A +V L Sbjct: 36 FTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARVAL 211 HSP 2 Score: 26.9498 bits (58), Expect = 4.062e-26 Identity = 11/26 (42.31%), Postives = 17/26 (65.38%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCMRHFLHQQHFPD 136 K V +GDGA GKT + + + +FP+ Sbjct: 18 KIVILGDGACGKTSLLNVFTRGYFPE 43
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RHO3_SCHCO (GTP-binding protein Rho3 OS=Schizophyllum commune GN=RHO3 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.072e-26 Identity = 64/148 (43.24%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEE---LRKLIGAPVYIECSSKTQQNVKAVF 548 +T F Y PTVF+N+ ++ +D V L LWDTAGQE+++RLR LSY V ++ FS+ + S ENV KW+ E+ Y PGV ++LV +K DLRDD L D T Q EE + + I A Y+ECSSK + V VF Sbjct: 37 FTRGFFTQVYEPTVFENYVHDLYIDDQLVELSLWDTAGQEEFDRLRSLSYAETHVIMICFSVDNPTSLENVESKWLDEILEYCPGVKLVLVDSKCDLRDDPAVL-DRLQRYGTHTDQYEEGLGVARRIRASRYLECSSKHNRGVNEVF 183 HSP 2 Score: 21.9422 bits (45), Expect = 4.072e-26 Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCM 103 K V GDGA GKT + Sbjct: 19 KVVVCGDGACGKTSL 33
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND2_MOUSE (Rho-related GTP-binding protein RhoN OS=Mus musculus GN=Rnd2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 57/162 (35.19%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 81 APSARLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSK-TQQNVKAVFDAA 557 A + A + + + +P YVPTVF+N++A+ +D + L +WDT+G Y+ +RPL+Y +D L+ F + + ++V KKW E + + P ++LVG KLD+R D L + +P+T QG L K +GA Y+ECSS+ ++++V+ VF A Sbjct: 16 AECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVA 177
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND2_HUMAN (Rho-related GTP-binding protein RhoN OS=Homo sapiens GN=RND2 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 57/162 (35.19%), Postives = 95/162 (58.64%), Query Frame = 3 Query: 81 APSARLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSK-TQQNVKAVFDAA 557 A + A + + + +P YVPTVF+N++A+ +D + L +WDT+G Y+ +RPL+Y +D L+ F + + ++V KKW E + + P ++LVG KLD+R D L + +P+T QG L K +GA Y+ECSS+ ++++V+ VF A Sbjct: 16 AECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVA 177
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RACN_DICDI (Rho-related protein racN OS=Dictyostelium discoideum GN=racN PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.574e-25 Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 129 FPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFD 551 FP +Y+PT+FDN + ++ + +G WDT G E+Y R PLSY ++FL+ FS+ S+ S+ N W+PE+ + P VPIILVGTK DLR+ + + +T +G E++ I A Y+ECSS + V +FD Sbjct: 29 FPLEYIPTIFDNHYFEIKINDQIMRIGCWDTGGGEEYPR--PLSYPQTNLFLILFSISSRNSFNNCETYWLPEVTKFLPSVPIILVGTKTDLRNCDDY---KDKSTFVTYEEGLEMKDKINASAYLECSSLLNKGVDDLFD 164 HSP 2 Score: 21.9422 bits (45), Expect = 2.574e-25 Identity = 8/18 (44.44%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 50 RFIKCVTVGDGAVGKTCM 103 + IK V +GD +GKT + Sbjct: 4 KIIKAVVLGDVTIGKTSL 21
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND1_BOVIN (Rho-related GTP-binding protein Rho6 OS=Bos taurus GN=RND1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.116e-24 Identity = 56/154 (36.36%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 129 FPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKT-QQNVKAVFDAAIKVVLQPP 581 +P YVPTVF+N++A + + V L LWDT+G Y+ +RPL Y +D LL F + + ++ KKW E+ Y P ++L+G K DLR D L + H PI+ QG + K +GA +Y+E S+ T ++++ ++F A V L P Sbjct: 38 YPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMVCLNKP 191 HSP 2 Score: 23.0978 bits (48), Expect = 2.116e-24 Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCMRHFLHQQHFPD 136 K V VGD GKT M L + +P+ Sbjct: 15 KLVLVGDVQCGKTAMLQVLAKDCYPE 40
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RND1_HUMAN (Rho-related GTP-binding protein Rho6 OS=Homo sapiens GN=RND1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.754e-24 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = 3 Query: 129 FPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLAD--HPGAVPITTAQGEELRKLIGAPVYIECSSKT-QQNVKAVFDAAIKVVLQPPKNTKKK 599 +P YVPTVF+N++A + + V L LWDT+G Y+ +RPL Y +D LL F + + ++ KKW E+ Y P ++L+G K DLR D L + H PI+ QG + K +GA +Y+E S+ T ++++ ++F A + L P +K Sbjct: 38 YPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPSPLPQK 197 HSP 2 Score: 23.0978 bits (48), Expect = 2.754e-24 Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCMRHFLHQQHFPD 136 K V VGD GKT M L + +P+ Sbjct: 15 KLVLVGDVQCGKTAMLQVLAKDCYPE 40 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |