BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12 Identity = 42/156 (26.92%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 Y ++F +V TV +F + + + L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ ++LVG K D+ D++ +++ +G +L +G + E S+K NVK F+ + V+ + Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER----------VVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVICE 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12 Identity = 42/156 (26.92%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 Y ++F +V TV +F + + + L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ ++LVG K D+ D++ +++ +G +L +G + E S+K NVK F+ + V+ + Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER----------VVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVICE 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12 Identity = 42/156 (26.92%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 Y ++F +V TV +F + + + L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ ++LVG K D+ D++ +++ +G +L +G + E S+K NVK F+ + V+ + Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER----------VVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVICE 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 5.842e-12 Identity = 42/156 (26.92%), Postives = 79/156 (50.64%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 Y ++F +V TV +F + + + L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ ++LVG K D+ D++ +++ +G +L +G + E S+K NVK F+ + V+ + Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER----------VVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVICE 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB24_DICDI (Ras-related protein Rab-24 OS=Dictyostelium discoideum GN=rab24 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.396e-12 Identity = 50/151 (33.11%), Postives = 77/151 (50.99%), Query Frame = 3 Query: 102 CVIS-YTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 C+++ YTS F + T+ FS+ VV G T V LG+WDTAG E Y + YR A+ ++ + L ++ S+E V W EL P + I +VGTKLDL A + + ++ + A ++ E SS+T +NV +F Sbjct: 22 CIVTRYTSGQFGDTHT-TIGGAFSSKRVVVGETEVLLGIWDTAGTERYQAVNVSYYRRANAAIVCYDLTNRESWEKVT-FWAEELTQNEPEIEIYIVGTKLDLIQQGDIKA-------VPEEEVKQTARRYKAHIF-ETSSRTGENVSLLF 162 HSP 2 Score: 21.557 bits (44), Expect = 7.396e-12 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKTCM 103 +K V +G +VGKTC+ Sbjct: 8 LKVVLLGYASVGKTCI 23
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 7.406e-12 Identity = 48/165 (29.09%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV--LQPPKN 587 V + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ EL+ + P + + + G K DL D ++ VP+ A +E + IGA V +E S+K N++ +F + + L P +N Sbjct: 22 VCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGALV-VETSAKNAINIEELFQGISRQIPPLDPHEN 174 HSP 2 Score: 20.7866 bits (42), Expect = 7.406e-12 Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = 2 Query: 44 ASRFIKCVTVGDGAVGKTCMRHFLHQQHF 130 A R +K +GD VGK+ + Q HF Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHF 30
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.406e-12 Identity = 47/165 (28.48%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGL-WDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV--LQPPKN 587 V + + F + PT+ +F V G+ ++ L WDTAGQE ++ L P+ YRG+ ++ + + + S+ + KKW+ EL+ + P + + + G K DL D ++ VP+ A +E + IGA + +E S+K N++ +F + + L P +N Sbjct: 22 VCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTL-KKWVKELKEHGPENIVMAIAGNKCDLSDIRE--------VPLKDA--KEYAESIGA-IVVETSAKNAINIEELFQGISRQIPPLGPQEN 174 HSP 2 Score: 20.7866 bits (42), Expect = 7.406e-12 Identity = 11/29 (37.93%), Postives = 15/29 (51.72%), Query Frame = 2 Query: 44 ASRFIKCVTVGDGAVGKTCMRHFLHQQHF 130 A R +K +GD VGK+ + Q HF Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHF 30
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYAEDNSL---LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 46/154 (29.87%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 569 Y ++F +V TV +F V + L +WDTAGQE Y + YRGA FLL + + ++ S+ V + W +++ Y+ +ILVG K DL D++ ++ G+ L +G + E S+K NVK VF+ + ++ Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAV-QDWATQIKTYSWDNAQVILVGNKCDLEDER----------VVSAEDGQRLAGDLGFE-FFEASAKENINVKQVFERLVDII 183
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 Y ++F +V TV +F V + L +WDTAGQE Y + YRGA FLL + + ++ S+ V + W +++ Y+ +ILVG K DL D++ A+ G L +G + E S+K NVK VF+ + V+ + Sbjct: 42 YADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAE----------DGRRLADDLGFE-FFEASAKENINVKQVFERLVDVICE 185 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |