BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 + + + + ++F Y T+ D S + ++ TV L LWDTAGQE + L P R + V ++ + + + S+ + KWI ++R V I+LVG K DL D +Q +TT +GE K + ++IE S+K NVK +F Sbjct: 23 KTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTS-KWIDDVRTERGSDVIIMLVGNKTDLSDKRQ----------VTTDEGERKAKELNV-MFIETSAKAGYNVKQLF 164
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_PONAB (Ras-related protein Rab-5C OS=Pongo abelii GN=RAB5C PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYADDNSL---LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYADDNSL---LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_HUMAN (Ras-related protein Rab-5C OS=Homo sapiens GN=RAB5C PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYADDNSL---LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + AV AQ + +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASKR--------AVEFQEAQAYADDNSL---LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.242e-11 Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 416 V + + F Y+ T N S ++ + +WDTAGQE LR Y GAD ++ F + S+ +Y+N+ KW +L VPI+LVG K+D +D K Sbjct: 28 VTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNI-PKWHKDLTRICENVPIVLVGNKVDSKDSK 131 HSP 2 Score: 23.483 bits (49), Expect = 1.242e-11 Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 59 KCVTVGDGAVGKT 97 K V VGDG VGKT Sbjct: 13 KLVLVGDGGVGKT 25
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB13_RAT (Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 1.246e-11 Identity = 40/158 (25.32%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 +I + + F + Y+ T+ +F V ++G + L +WDTAGQE + + YRGA +L + + + S+EN+ + W+ ++ A GV +L+G K D+ ++ + + A+ +R + E S+K+ NV F + + +L Sbjct: 25 IIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENI-QNWMKSIKENASAGVERLLLGNKCDMEAKRKVQREQAERL----AREHRIR-------FFETSAKSSVNVDEAFSSLARDIL 170 HSP 2 Score: 23.8682 bits (50), Expect = 1.246e-11 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCM 103 K + +GD VGKTC+ Sbjct: 10 KLLLIGDSGVGKTCL 24
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: YPT10_YEAST (GTP-binding protein YPT10 OS=Saccharomyces cerevisiae GN=YPT10 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 1.248e-11 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 186 DGST---VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 D ST +++ +WDTAGQE Y L P+ YR A++ L+ F L +S + AK W +L+ A G +I+VG K DL +H G V I +L G P Y+ S+KT N FD K+++ Sbjct: 52 DSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQ-CAKTWFQDLQDRAQGTQVIIVGNKYDL-----VCEEHSGEVTIPA-------ELQGLP-YVAVSAKTGYN----FDTLNKIII 165 HSP 2 Score: 21.9422 bits (45), Expect = 1.248e-11 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKT 97 IK V +GD +VGKT Sbjct: 5 IKVVLLGDSSVGKT 18
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAS_CRYNE (Ras-like protein OS=Cryptococcus neoformans GN=RAS1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11 Identity = 47/165 (28.48%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNT 590 A I + + F +Y PT+ D++ ++D L + DTAGQE+Y +R R + FLL +S+ S++S+E V+ LR P+++V K DL ++Q + +G +L K A IE S+K + NV F A ++ + + K + Sbjct: 24 ALTIQFIQSHFVDEYDPTIEDSYRKQCIIDEEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRSSFEEVSTFHQQILRVKDKDYFPVVVVANKCDLEYERQ----------VQPHEGRDLAKRFNAQC-IETSAKQRVNVDEAFIAVVRAIRRYQKES 177
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAP1B_CYPCA (Ras-related protein Rap-1b OS=Cyprinus carpio GN=rap1b PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11 Identity = 47/171 (27.49%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF-DAAIKVVLQPPKNTKKKKR 605 A + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VPIILVG K DL D++ + QG+ L + + ++E S+K++ NV +F D ++ + P K +K+ Sbjct: 18 ALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPIILVGNKCDLEDER----------VVGKEQGQNLARQWNSCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |