BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.730e-11 Identity = 42/152 (27.63%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 102 CVI-SYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 CV+ ++ + F T ++ T+ D V + G + L +WDTAGQE ++ + YRGA +L + + + S+EN++ KW+ + H V +L+G K D+ D + + A+GE++ + G + E S+K N++ F Sbjct: 24 CVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMEDKR----------VVPKAKGEQIAREHGIR-FFETSAKANINIEKAF 163 HSP 2 Score: 23.483 bits (49), Expect = 2.730e-11 Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCM 103 K + +GD VGKTC+ Sbjct: 11 KLLLIGDSGVGKTCV 25
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 47/154 (30.52%), Postives = 78/154 (50.65%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 + + + + + F Y T+ D S + ++ TV L LWDTAGQE + L P R + V ++ + + + S+ N +KWI ++R V I+LVG K DL D +Q +T +GE+ K + +++E S+K NVK +F Sbjct: 24 KTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKTDLADKRQ----------VTQEEGEKKAKELKI-MHMETSAKAGHNVKLLF 165
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 43/164 (26.22%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVA--KKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPK 584 A + + S+ FP D+ PT+ D + + +D NL + DTAGQ ++ +R R + F++ +S+ + S+ V K+ I +R P++LVG K DL+ +Q +T +G L + P + E S+ + + VF A ++ + + K Sbjct: 36 AMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRR-TDDTPVVLVGNKSDLKQLRQ----------VTKEEGLALAREFSCP-FFETSAAYRYYIDDVFHALVREIRRKEK 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RASEF_DANRE (RAS and EF-hand domain-containing protein OS=Danio rerio GN=rasef PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 50/177 (28.25%), Postives = 91/177 (51.41%), Query Frame = 3 Query: 81 APSARLACVISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKNTKKKKR 605 A S + + ++ + N F D T+ +F ++VDG NL +WDTAGQE + + +R A LL + + S++S+ NV ++W+ ++R +P+ ++G K+DLR A P +++ GE+L A ++ E S+K N V +A + + + K+ K +R Sbjct: 476 AGSGKSSFLLRLSLNEFRGDIQTTLGVDFQIKKMLVDGEKTNLQIWDTAGQERFRSIARSYFRKAHGVLLLYDVTSESSFLNV-REWVEQIRESTDEDIPMCIIGNKVDLR------AARPEGSCVSSIHGEKLAMNYNA-LFCEASAKEGTN---VIEAVLHLAREVKKHVKLGRR 641
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 48/138 (34.78%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 177 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN 587 V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + + ++ AK W+ EL R +P + I L G K DL + D A T A L +++E S+KT NV +F A K + PKN Sbjct: 63 VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVR-AKNWVKELQRQASPNIVIALAGNKADLATKR--AVDFQDAQ--TYADDNSL-------LFMETSAKTAMNVNEIFMAIAKKL---PKN 185
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 174 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDA-AIKVVLQPPKN 587 +V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ ++ AK W+ EL R +P + I L G K DL + + + A A L +++E S+KT NV +F A A K+ P+N Sbjct: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAY----ADDNSL-------LFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 188
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 174 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDA-AIKVVLQPPKN 587 +V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ ++ AK W+ EL R +P + I L G K DL + + + A A L +++E S+KT NV +F A A K+ P+N Sbjct: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAY----ADDNSL-------LFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 188
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 46/140 (32.86%), Postives = 73/140 (52.14%), Query Frame = 3 Query: 174 NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDA-AIKVVLQPPKN 587 +V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ ++ AK W+ EL R +P + I L G K DL + + + A A L +++E S+KT NV +F A A K+ P+N Sbjct: 61 SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQAY----ADDNSL-------LFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 188
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 3 Query: 114 YTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 +T +TF TV +F V + G + L +WDTAGQE +N + YR A +L + + K +++++ KW+ + YA ++LVG KLD D++ IT QGE+ + I + E S+K NV +F + +L+ Sbjct: 62 FTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILK 206
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 3.539e-11 Identity = 39/155 (25.16%), Postives = 78/155 (50.32%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 563 ++ ++ ++F ++ T+ +F + ++G + L +WDTAGQE + + YRGA LL + + + S+ N+ + WI + +H V +L+G K D+ + K + +++G+ L G ++E S+K NV+ F + K Sbjct: 32 LLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNI-RNWIRNIEQHATDSVNKMLIGNKCDMAEKK----------VVDSSRGKSLADEYGIK-FLETSAKNSINVEEAFISLAK 174 HSP 2 Score: 23.8682 bits (50), Expect = 3.539e-11 Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 56 IKCVTVGDGAVGKTCM 103 IK + +GD VGK+C+ Sbjct: 16 IKLLLIGDSGVGKSCL 31 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |