BQ623186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.958e-11 Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQ 575 ++ +T F + T+ F A ++ +DG + L +WDTAGQE + + YRGA LL + + + ++ ++ W+ + R H + I+L+G K DL ++ + +GE + G +++E S+KT NV+ F K + + Sbjct: 23 LLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESRRE----------VKKEEGEAFAREHGL-IFMETSAKTASNVEEAFINTAKEIYE 169 HSP 2 Score: 23.0978 bits (48), Expect = 5.958e-11 Identity = 8/22 (36.36%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 38 MSASRFIKCVTVGDGAVGKTCM 103 M+ + K + +GD VGK+C+ Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCL 22
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 63.929 bits (154), Expect = 5.973e-11 Identity = 42/150 (28.00%), Postives = 76/150 (50.67%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 ++ + +T+ ++ T+ +F + ++G T+ L +WDTAGQE + + YRGA ++ + + K ++ENV ++W+ E+ +A V +LVG K DL K V TA+ + P ++E S+K NV+ F Sbjct: 25 LLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENV-RQWLQEIDRFACENVNKLLVGNKSDLVAKK--------VVDFNTAKA--FADSLQIP-FLETSAKQSTNVEQAF 162 HSP 2 Score: 22.3274 bits (46), Expect = 5.973e-11 Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 59 KCVTVGDGAVGKTCM 103 K + +GD VGK+C+ Sbjct: 10 KLLLIGDSGVGKSCL 24
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RIT1_MOUSE (GTP-binding protein Rit1 OS=Mus musculus GN=Rit1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 42/164 (25.61%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVA--KKWIPELRHYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPK 584 A + + S+ FP D+ PT+ D + + +D NL + DTAGQ ++ +R R + F++ +S+ + S+ V K+ I +R P++LVG K DL+ +Q ++ +G L + P + E S+ + + VF A ++ + + K Sbjct: 36 AMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRR-TDDTPVVLVGNKSDLKQLRQ----------VSKEEGLSLAREFSCP-FFETSAAYRYYIDDVFHALVREIRKKEK 187
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAS_EMENI (Ras-like protein OS=Emericella nidulans GN=AN0182 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 48/148 (32.43%), Postives = 76/148 (51.35%), Query Frame = 3 Query: 108 ISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 548 I + F +Y PT+ D++ V+D L + DTAGQE+Y+ +R R + FLL +S+ S+ S+E + LR PII+VG K DL DK+ + ++ +GE L + G +IE S+K++ NV+ F Sbjct: 26 IQLIQSHFVDEYDPTIEDSYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDL--DKERV--------VSEQEGESLARQFGCK-FIETSAKSRINVENAF 162
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RASV_DICDI (Ras-like protein rasV OS=Dictyostelium discoideum GN=rasV PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 44/157 (28.03%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 93 RLACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHY-APGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 560 + A + SN F Y PT+ D++ + V + L + DTAGQ++ +R R + F+L +S+ K+S+ V +R VPI+++G K DL +++Q +T +G+EL + +G ++E S+K + N+ VF A+ Sbjct: 46 KTAVTTQFISNHFVYYYDPTIEDSYRKQICVSDKSYILDILDTAGQDELTAMRDQWIRSCEGFVLVYSITCKSSFNQVLNFREQIIRVLDRDDVPIMMIGNKSDLVNERQ----------VTYHEGKELAQRLGMS-FMEVSAKNRSNIDEVFHEAV 191
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAPB_DICDI (Ras-related protein rapB OS=Dictyostelium discoideum GN=rapB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 50/176 (28.41%), Postives = 87/176 (49.43%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHY--APGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVLQPPKN----TKKKKRR 608 A + +T F Y PTV D ++ +DG V + + DTAG E +R L + A+ F+L +S++ K+++ + K + +L VPI+LVG K+DL ++ ++T +G++L + E SSK + NV VF + +K + + K K+KK + Sbjct: 37 ALTVQFTQGVFIDKYDPTVEDTYTKTFELDGEQVCIEVLDTAGSEVLVAMRELYMKNAEGFILVYSILVKSTFLEI-KDIVEQLFRVKEEEEVPIVLVGNKIDLDAHRE----------VSTNEGKQLANSYPNCDFWEASSKDRINVDNVFFSIVKRIKEKYKKEGAPVKEKKEK 201
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 46/171 (26.90%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF-DAAIKVVLQPPKNTKKKKR 605 A + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VP+ILVG K DL D++ + QG+ L + ++E S+K++ NV +F D ++ + P K +K+ Sbjct: 18 ALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 46/171 (26.90%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 99 ACVISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF-DAAIKVVLQPPKNTKKKKR 605 A + + F Y PT+ D++ V VDG L + DTAG E + +R L + F L +S+ +++++ ++ LR VP+ILVG K DL D++ + QG+ L + ++E S+K++ NV +F D ++ + P K +K+ Sbjct: 18 ALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDER----------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKK 178
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 35/106 (33.02%), Postives = 58/106 (54.72%), Query Frame = 3 Query: 105 VISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDK 416 ++ +T +TF Y+ T+ +F V ++G + L +WDTAGQE + YRG ++ + + + S+ENVA KWI E+ YA V +++G K D+ K Sbjct: 25 LLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVA-KWIQEIERYARDNVIKMIIGNKSDMISQK 129
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 50/161 (31.06%), Postives = 80/161 (49.69%), Query Frame = 3 Query: 99 ACVI-SYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDDKQFLADHPGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVVL 572 +C++ + N F D T+ F + VV V G TV L +WDTAGQE + + YRGA LL + + S+ +Y ++A W+ + R A P + +IL G K DL +++ AQ EL +++E S+ T +NV+ F + +L Sbjct: 22 SCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRF----AQENEL-------MFLETSALTGENVEEAFLKCARTIL 170 The following BLAST results are available for this feature:
BLAST of BQ623186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623186 ID=BQ623186; Name=BQ623186; organism=Citrus sinensis; type=EST; length=610bpback to top |