BQ623188
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 1.822e-70 Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 65 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELK 206 HSP 2 Score: 35.4242 bits (80), Expect = 1.822e-70 Identity = 15/27 (55.56%), Postives = 18/27 (66.67%), Query Frame = 2 Query: 20 SAPQSIWYGPDRPKYLGPFSEQTPSYI 100 +A S WYG DR YLGP S + PSY+ Sbjct: 39 AASGSPWYGADRVLYLGPLSGEPPSYL 65 HSP 3 Score: 31.9574 bits (71), Expect = 1.822e-70 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 206 KVKEIKNGRLAMFSMF 221
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.824e-70 Identity = 112/142 (78.87%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFSEGGLDYLGN +LIHAQSILAIWA QV+LMG VEGYRI +FDPL LADDP+ FAELK Sbjct: 49 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELK 190 HSP 2 Score: 43.5134 bits (101), Expect = 1.824e-70 Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 2 Query: 8 RTVKSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 +TV S S WYGPDR KYLGPFS + PSY+ Sbjct: 21 KTVSSG--SPWYGPDRVKYLGPFSGEPPSYL 49 HSP 3 Score: 31.9574 bits (71), Expect = 1.824e-70 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 190 KVKEIKNGRLAMFSMF 205
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.827e-70 Identity = 113/142 (79.58%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYRI +FDPLGLA+ P+ FAELK Sbjct: 32 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELK 173 HSP 2 Score: 39.2762 bits (90), Expect = 1.827e-70 Identity = 15/27 (55.56%), Postives = 21/27 (77.78%), Query Frame = 2 Query: 20 SAPQSIWYGPDRPKYLGPFSEQTPSYI 100 ++ S W+GPD KYLGPFS ++PSY+ Sbjct: 6 ASSSSPWHGPDGVKYLGPFSGESPSYL 32 HSP 3 Score: 32.7278 bits (73), Expect = 1.827e-70 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 173 KVKELKNGRLAMFSMF 188
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 2.373e-70 Identity = 115/142 (80.99%), Postives = 122/142 (85.92%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP+ F ELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELK 210 HSP 2 Score: 38.5058 bits (88), Expect = 2.373e-70 Identity = 16/27 (59.26%), Postives = 19/27 (70.37%), Query Frame = 2 Query: 20 SAPQSIWYGPDRPKYLGPFSEQTPSYI 100 +A S WYGPDR YLGP S + PSY+ Sbjct: 43 AASGSPWYGPDRVLYLGPLSGEPPSYL 69 HSP 3 Score: 28.1054 bits (61), Expect = 2.373e-70 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELK GRLAM MF Sbjct: 210 KVKELKKGRLAMLSMF 225
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 6.823e-70 Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI-XXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYR+ +FDPLGLA DP+ FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELK 212 HSP 2 Score: 43.5134 bits (101), Expect = 6.823e-70 Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 2 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV K S WYG DR KYLGPFS ++PSY+ Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYL 70 HSP 3 Score: 32.7278 bits (73), Expect = 6.823e-70 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 212 KVKELKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 6.823e-70 Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI-XXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYR+ +FDPLGLA DP+ FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELK 212 HSP 2 Score: 43.5134 bits (101), Expect = 6.823e-70 Identity = 21/36 (58.33%), Postives = 25/36 (69.44%), Query Frame = 2 Query: 2 MRRTV---KSAPQSIWYGPDRPKYLGPFSEQTPSYI 100 MR+TV K S WYG DR KYLGPFS ++PSY+ Sbjct: 35 MRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYL 70 HSP 3 Score: 32.7278 bits (73), Expect = 6.823e-70 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 212 KVKELKNGRLAMFSMF 227
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.963e-69 Identity = 110/143 (76.92%), Postives = 121/143 (84.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI-XXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWA QV+LMG VEGYR+ +FDPLGLA DP+ FAELK Sbjct: 69 LTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELK 211 HSP 2 Score: 43.5134 bits (101), Expect = 1.963e-69 Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 2 Query: 2 MRRTVK-SAPQ-SIWYGPDRPKYLGPFSEQTPSYI 100 MR+TVK + P S WYG DR KYLGPFS + PSY+ Sbjct: 35 MRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYL 69 HSP 3 Score: 31.9574 bits (71), Expect = 1.963e-69 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 9.573e-69 Identity = 110/142 (77.46%), Postives = 120/142 (84.51%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NGVKFGEA WFKAG+QIFS+GGLDYLGNP+L+HAQS+LAIWACQVVLMG VEGYRI +FDPLGLA+ P FAELK Sbjct: 70 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELK 211 HSP 2 Score: 38.1206 bits (87), Expect = 9.573e-69 Identity = 19/37 (51.35%), Postives = 22/37 (59.46%), Query Frame = 2 Query: 2 MRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYI 100 MR+T A Q S WYG DR YLGP S + PSY+ Sbjct: 34 MRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYL 70 HSP 3 Score: 31.9574 bits (71), Expect = 9.573e-69 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 211 KVKEIKNGRLAMFSMF 226
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 3.930e-67 Identity = 116/142 (81.69%), Postives = 123/142 (86.62%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHS WAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI +FDPLGLADDP+ FAELK Sbjct: 10 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELK 151 HSP 2 Score: 32.7278 bits (73), Expect = 3.930e-67 Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKELKNGRLAMF MF Sbjct: 151 KVKELKNGRLAMFSMF 166
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 6.262e-64 Identity = 103/142 (72.54%), Postives = 115/142 (80.99%), Query Frame = 3 Query: 99 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRIXXXXXXXXXXXXXXXXAFDPLGLADDPDQFAELK 524 LTGEFPGDYGWDT GLSADPETFAKNRELEVIH RWA+ LGCVFPE+L++NGVKFGE VWFKAG+QIFSEGGL + GNP+L+HAQSILAIWACQVVLMG VEGY + +FDPLGL DDP++FAELK Sbjct: 68 LTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELK 209 HSP 2 Score: 33.8834 bits (76), Expect = 6.262e-64 Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 32 SIWYGPDRPKYLGPFSEQTPSYI 100 S WYG DR YLGP S PSY+ Sbjct: 46 SPWYGADRVLYLGPLSGSPPSYL 68 HSP 3 Score: 31.9574 bits (71), Expect = 6.262e-64 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1 Query: 523 KVKELKNGRLAMFYMF 570 KVKE+KNGRLAMF MF Sbjct: 209 KVKEIKNGRLAMFSMF 224 The following BLAST results are available for this feature:
BLAST of BQ623188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623188 ID=BQ623188; Name=BQ623188; organism=Citrus sinensis; type=EST; length=576bpback to top |