BQ623191

Overview
NameBQ623191
Unique NameBQ623191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig383 contig Csv1_Contig383:27..546. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_BURS3 (Chaperone protein dnaJ OS=Burkholderia sp. (strain 383) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  +A ++EI+  Y +LA+K+HPD+  D   A   F+E+ EAY++LSD  KR  YD  G
Sbjct:    4 RDYYEVLGVAKNAGDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDGQKRAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DJB14_XENTR (DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  100 DFLSLLAKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            D +  + K K YY++L V  DA EE+++  Y +LALK+HPDK      AT  F++I  AY VLS+P KR++YD  G
Sbjct:   96 DGVQRIKKCKTYYEVLGVSTDAGEEDLKKAYRKLALKFHPDK-NHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTG 170          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNJ5B_HUMAN (DnaJ homolog subfamily C member 5B OS=Homo sapiens GN=DNAJC5B PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 36/82 (43.90%), Postives = 48/82 (58.54%), Query Frame = 1
Query:  136 YKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKGMLHIY------DRNIIEY 363
            Y+IL +   A+ EEI+  Y +LALK HPDK  D   AT +F+EIN A+ +L+D  KR  YD  G L +Y      D N+  Y
Sbjct:   21 YEILGLHKGASNEEIKKTYRKLALKHHPDKNPDDPAATEKFKEINNAHAILTDISKRSIYDKYGSLGLYVAEQFGDENVNTY 102          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCP (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V   A++EE++  Y R A+K+HPD+      A + F+E  EAY+VLSD  KRR YD+ G
Sbjct:    4 RDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_XANCB (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain B100) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V   A++EE++  Y R A+K+HPD+      A + F+E  EAY+VLSD  KRR YD+ G
Sbjct:    4 RDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC8 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. campestris (strain 8004) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V   A++EE++  Y R A+K+HPD+      A + F+E  EAY+VLSD  KRR YD+ G
Sbjct:    4 RDYYEVLGVARGASDEELKKAYRRCAMKYHPDRNPGDAAAEATFKECKEAYEVLSDGNKRRAYDAHG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_WOLWR (Chaperone protein dnaJ OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            KDYY +LEV  +A+ +EI+  Y +LALK+HPD+      A  +F+E+  AY+VLSD  KR  YD  G
Sbjct:    4 KDYYDLLEVGRNASIDEIKKAYKKLALKYHPDRNPGNQEAEEKFKEVTAAYEVLSDSEKRAGYDRYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_TREDE (Chaperone protein dnaJ OS=Treponema denticola GN=dnaJ PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1
Query:  118 AKPKDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            A  +DYY++L VD  A+ ++I+  Y +LA+K+HPDK +    A  +F+E  EAY++L D  KR  YD  G
Sbjct:    3 ASKRDYYEVLGVDKKASNDDIKKAYRKLAIKYHPDKNQGDKAAEEKFKEATEAYEILIDEKKRSMYDQFG 72          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_TERTT (Chaperone protein dnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  D +E++++  Y ++A+K+HPD+  D   A  +F+E +EAY+VLSD  KR  YD  G
Sbjct:    4 RDYYEVLGVARDVSEQDLKKAYRKVAMKFHPDRNPDDASAEEKFKEASEAYEVLSDKQKRAAYDQFG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_STRM5 (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain R551-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V   A +EE++  Y R A+K+HPD+      A + F+E  EAY+VLSD  KRR YDS G
Sbjct:    4 RDYYEVLGVARTANDEELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHG 70          
The following BLAST results are available for this feature:
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
DNAJ_BURS34.580e-1144.78Chaperone protein dnaJ OS=Burkholderia sp. (strain... [more]
DJB14_XENTR4.580e-1146.05DnaJ homolog subfamily B member 14 OS=Xenopus trop... [more]
DNJ5B_HUMAN5.982e-1143.90DnaJ homolog subfamily C member 5B OS=Homo sapiens... [more]
DNAJ_XANCP5.982e-1146.27Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANCB5.982e-1146.27Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_XANC85.982e-1146.27Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNAJ_WOLWR5.982e-1147.76Chaperone protein dnaJ OS=Wolbachia sp. subsp. Dro... [more]
DNAJ_TREDE5.982e-1142.86Chaperone protein dnaJ OS=Treponema denticola GN=d... [more]
DNAJ_TERTT5.982e-1143.28Chaperone protein dnaJ OS=Teredinibacter turnerae ... [more]
DNAJ_STRM55.982e-1147.76Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00282 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00282 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623191 ID=BQ623191; Name=BQ623191; organism=Citrus sinensis; type=EST; length=520bp
GTTTGTGTCCCCTCTACTAAAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACCCAACAGGATTCCCATGTCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTT
back to top