BQ623191

Overview
NameBQ623191
Unique NameBQ623191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig383 contig Csv1_Contig383:27..546. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  130 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQ-KDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            DYY++L V   A+ E+I+  Y +LALKWHPDK  ++++ A  +F+++ EAY+VLSD  KR  YD  G
Sbjct:    3 DYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYG 69          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_WIGBR (Chaperone protein dnaJ OS=Wigglesworthia glossinidia brevipalpis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  130 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            DYY IL +  +A++ EI++ Y RLA+K+HPD+      A S+F+EI EAY+VL DP KR  Y+  G
Sbjct:    5 DYYDILGISKNASDREIKTAYKRLAVKFHPDRNPGNLEAESKFKEIKEAYEVLLDPKKRAAYNQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_UREPA (Chaperone protein dnaJ OS=Ureaplasma parvum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY+IL V   AT EEI++ + +LA + HPD+ K  D   + F+EINEAY+VLSD  KR +YD  G
Sbjct:    4 RDYYEILGVSKSATPEEIKAAFRKLAKEHHPDRNKSAD--DTLFKEINEAYEVLSDSKKRAQYDQFG 68          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNJA (Chaperone protein dnaJ OS=Synechococcus sp. (strain JA-3-3Ab) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY+IL V  D+++EEI+  Y RLA K+HPD  K+   A  RF+EIN AY+VLSD   R  YD  G
Sbjct:    3 RDYYEILGVSRDSSKEEIKRAYRRLARKYHPDVNKEPG-AEDRFKEINRAYEVLSDDELRARYDRFG 68          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEFN (Chaperone protein dnaJ OS=Shewanella frigidimarina (strain NCIMB 400) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  D +E EI+  Y RLA+K+HPD+      A + F+EI EAY++L+D  K+  YD  G
Sbjct:    4 RDYYEVLGVGRDTSEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEIKEAYEILTDSDKKAAYDQFG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEAM (Chaperone protein dnaJ OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  DA+E EI+  Y RLA+K+HPD+      A + F+E+ EAY++L+D  K+  YD  G
Sbjct:    4 RDYYEVLGVGRDASEREIKKAYKRLAMKYHPDRNPGDKEAEASFKEVKEAYEILTDTDKKAAYDQFG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_RHIRD (Chaperone protein dnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  130 DYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            D+Y+ L V   A E+E++S + +LA+K+HPDK  D   +  +F+EINEAY+ L DP KR  YD  G
Sbjct:    5 DFYETLGVSKTADEKELKSAFRKLAMKYHPDKNPDDADSERKFKEINEAYETLKDPQKRAAYDRFG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_RALPJ (Chaperone protein dnaJ OS=Ralstonia pickettii (strain 12J) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V  +A+++EI+  Y +LA+K+HPD+  D   A  +F+E  EAY++LSD  K+  YD  G
Sbjct:    4 RDYYEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPDSKEAEDKFKEAKEAYEMLSDAEKKAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEU2 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V+  ++E +++  Y RLA+K HPD+  D   +   F+E NEAY+VLSD  KR  YD  G
Sbjct:    4 RDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPK (Chaperone protein dnaJ OS=Pseudomonas putida (strain KT2440) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  127 KDYYKILEVDYDATEEEIRSNYIRLALKWHPDKQKDRDCATSRFQEINEAYQVLSDPVKRREYDSKG 327
            +DYY++L V+  ATE +++  Y RLA+K+HPD+      +  +F+E NEAY+VLSD  KR  +D  G
Sbjct:    4 RDYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYG 70          
The following BLAST results are available for this feature:
BLAST of BQ623191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 356
Match NameE-valueIdentityDescription
DNJB6_HUMAN7.813e-1147.76DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNAJ_WIGBR7.813e-1148.48Chaperone protein dnaJ OS=Wigglesworthia glossinid... [more]
DNAJ_UREPA7.813e-1150.75Chaperone protein dnaJ OS=Ureaplasma parvum GN=dna... [more]
DNAJ_SYNJA7.813e-1152.24Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_SHEFN7.813e-1144.78Chaperone protein dnaJ OS=Shewanella frigidimarina... [more]
DNAJ_SHEAM7.813e-1144.78Chaperone protein dnaJ OS=Shewanella amazonensis (... [more]
DNAJ_RHIRD7.813e-1146.97Chaperone protein dnaJ OS=Rhizobium radiobacter GN... [more]
DNAJ_RALPJ7.813e-1143.28Chaperone protein dnaJ OS=Ralstonia pickettii (str... [more]
DNAJ_PSEU27.813e-1144.78Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_PSEPK7.813e-1144.78Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00282 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00282 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623191 ID=BQ623191; Name=BQ623191; organism=Citrus sinensis; type=EST; length=520bp
GTTTGTGTCCCCTCTACTAAAGAGGTCATGATGTGGGACGAATGGGTCGA
TTGCAACAATAACGATGAACAAACCCAACAGGATTCCCATGTCAATTTTG
ATTTTCTTTCTCTTCTCGCCAAACCCAAGGATTATTATAAAATATTGGAA
GTTGATTACGATGCCACGGAGGAAGAAATTAGGTCCAATTACATTCGTCT
AGCGCTGAAATGGCACCCAGATAAGCAAAAGGATCGAGATTGTGCAACTT
CGAGATTTCAAGAGATAAACGAGGCTTACCAGGTTTTGAGCGATCCTGTC
AAAAGGAGAGAATATGACAGCAAAGGGATGTTGCACATATATGATCGCAA
CATAATTGAGTATCTTAATCGCTACAAGGGCTTAATATTAACTTGCAATG
GTCTTGGGATGAGGCATTCAATTGTGTAATATGTTGTCAGCACAGTTGGG
GCAGTTCATATTGGGAGGCATAGAATTACCAATGCTGCAAATAGCATTGA
GGGCATGGAGAATAGCAGTT
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