BQ623201

Overview
NameBQ623201
Unique NameBQ623201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length538
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2300 contig Csv1_Contig2300:504..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A2_HUMAN (Solute carrier family 23 member 2 OS=Homo sapiens GN=SLC23A2 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.805e-29
Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLS--CRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I V W    I T    +   P+ TK     RTD R  +L  APW KVPYPFQWG P   A+ V GM+ A + +  ES G + A +R + A  PP H ++R I ++G+  +++GIFG+  G+T+S  N+G+LG+T +GSRRV+Q   A M               +P P+  A++C L
Sbjct:  317 ILAILVSWLLCFIFTVTDVFP--PDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTL 494          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A1_HUMAN (Solute carrier family 23 member 1 OS=Homo sapiens GN=SLC23A1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.805e-29
Identity = 66/178 (37.08%), Postives = 93/178 (52.25%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I  VW    +LT        P+      RTD R  +++ APWI++PYP QWG P   A+ V GM  A L    ES G + A +R AGA  PP H ++R I  +GI  ++ G+ G+  G+T+S  N+G+LG+T +GSRRVVQ   A M               +P PI   ++C L
Sbjct:  258 MLAIMTVWLLCYVLTLTDVLPTDPKAYGFQARTDARGDIMAIAPWIRIPYPCQWGLPTVTAAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAAIMLVLGTIGKFTALFASLPDPILGGMFCTL 435          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A2_XENTR (Solute carrier family 23 member 2 OS=Xenopus tropicalis GN=slc23a2 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.357e-29
Identity = 64/178 (35.96%), Postives = 97/178 (54.49%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I V W    I T    +     +     RTD R  +L+ APW KVPYPFQWG P   A+ V GM+ A + +  ES G + A +R + A  PP H ++R I ++G+  +++G+FG+  G+T+S  N+G+LG+T + SRRV+Q   AFM               +P P+  A++C L
Sbjct:  315 IMAILVSWLLCFIFTVTDVFPPDSSKYGYYARTDARQGVLTVAPWFKVPYPFQWGLPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFIEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVASRRVIQYGAAFMLLLGMIGKFSALFASLPDPVLGALFCTL 492          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A2_MOUSE (Solute carrier family 23 member 2 OS=Mus musculus GN=Slc23a2 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 4.021e-29
Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I V W    I T    + +         RTD R  +L  APW KVPYPFQWG P   A+ V GM+ A + +  ES G + A +R + A  PP H ++R I ++G+  +++GIFG+  G+T+S  N+G+LG+T +GSRRV+Q   A M               +P P+  A++C L
Sbjct:  315 ILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMVGKFSALFASLPDPVLGALFCTL 492          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A2_RAT (Solute carrier family 23 member 2 OS=Rattus norvegicus GN=Slc23a2 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.251e-29
Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I V W    I T    + +         RTD R  +L  APW KVPYPFQWG P   A+ V GM+ A + +  ES G + A +R + A  PP H ++R I ++G+  +++G+FG+  G+T+S  N+G+LG+T +GSRRV+Q   A M               +P P+  A++C L
Sbjct:  314 ILAILVSWLLCFIFTVTDVFPSNSTDYGYYARTDARKGVLLVAPWFKVPYPFQWGMPTVSAAGVIGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGVFGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAALMLGLGMIGKFSALFASLPDPVLGALFCTL 491          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A1_MOUSE (Solute carrier family 23 member 1 OS=Mus musculus GN=Slc23a1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.689e-27
Identity = 63/178 (35.39%), Postives = 90/178 (50.56%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I  VW    +LT        P       RTD R  +++ +PWI++PYP QWG P    + V GM  A L    ES G + A +R AGA  PP H ++R I  +GI  ++ G+ G+  G+T+S  N+G+LG+T +GSRRVVQ     M               +P PI   ++C L
Sbjct:  265 VLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGICCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTL 442          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: S23A1_RAT (Solute carrier family 23 member 1 OS=Rattus norvegicus GN=Slc23a1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.206e-27
Identity = 62/178 (34.83%), Postives = 90/178 (50.56%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTD-RSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            +  I  VW    +LT        P       RTD R  +++ +PWI++PYP QWG P    + V GM  A L    ES G + A +R AGA  PP H ++R I  +G+  ++ G+ G+  G+T+S  N+G+LG+T +GSRRVVQ     M               +P PI   ++C L
Sbjct:  265 VLAIMTVWLLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLAGIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVGSRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTL 442          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: NAT12_ARATH (Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana GN=NAT12 PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 9.270e-26
Identity = 63/192 (32.81%), Postives = 97/192 (50.52%), Query Frame = 3
Query:   12 IGVVWAFAAILTAAGAYN------NVPEQTKLS------------CRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            + + WA A +LT  GAY       NVP    +S            CR D S+ LSSAPW + PYP QWG P+F     F M   +++ S +S G++ A+S    +  P   V+SR+IGL+G   ++ G++G+  G+T   ENV  + +T +GSRRVV++    +               IP  + A++ C +
Sbjct:  371 LAITWAAAFLLTETGAYTYKGCDPNVPVSNVVSTHCRKYMTRMKYCRVDTSHALSSAPWFRFPYPLQWGVPLFNWKMAFVMCVVSVIASVDSVGSYHASSLLVASRPPTRGVVSRAIGLEGFTSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRVVELGACVLVIFSLVGKVGGFLASIPQVMVASLLCFM 562          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: NAT11_ARATH (Nucleobase-ascorbate transporter 11 OS=Arabidopsis thaliana GN=NAT11 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.133e-23
Identity = 61/190 (32.11%), Postives = 91/190 (47.89%), Query Frame = 3
Query:   18 VVWAFAAILTAAGAYN------NVPEQ------------TKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVL 533
            ++W +A  LT  GAY+      ++P              T   CRTD S    +A W+++PYPFQWG P F       MI  +LV S +S GT+ +AS    A  P   ++SR I L+G   L+ GI+GS  G+T   EN+  + +T + SRR + I   F+               IP  + A++ C +
Sbjct:  378 LIWTYAFFLTVGGAYDYRGCNADIPSSNILIDECKKHVYTMKHCRTDASNAWRTASWVRIPYPFQWGFPNFHMRTSIIMIFVSLVASVDSVGTYHSASMIVNAKRPTRGIVSRGIALEGFCSLLAGIWGSGTGSTTLTENIHTINITKVASRRALVIGAMFLIVLSFLGKLGAILASIPQALAASVLCFI 567          
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Match: NAT9_ARATH (Putative nucleobase-ascorbate transporter 9 OS=Arabidopsis thaliana GN=NAT9 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.809e-21
Identity = 61/178 (34.27%), Postives = 87/178 (48.88%), Query Frame = 3
Query:    3 LFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFGSLVGTTASVENVGLLGLTHIGSRRVVQISTAFMXXXXXXXXXXXXXXXIPLPIFAAIYCVLL 536
            + CI VVW FA +LT++G Y++ P+ T+ SCRTDR+ L+++ P            P F  +  F M+ A+ VT  ESTG F A++R+                                      +NVGLL +T +GSRRV+QIS AFM               IPLPI A++YC++L
Sbjct:  222 MLCIPVVWLFAQLLTSSGVYDHKPQTTQTSCRTDRTGLITNTP-----------CPTFDITDSFAMMAASFVTLFESTGLFYASARYG-------------------------------------KNVGLLAMTKVGSRRVIQISAAFMLFFSIFGKFGAFFASIPLPIMASLYCIVL 351          
The following BLAST results are available for this feature:
BLAST of BQ623201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
S23A2_HUMAN1.805e-2937.78Solute carrier family 23 member 2 OS=Homo sapiens ... [more]
S23A1_HUMAN1.805e-2937.08Solute carrier family 23 member 1 OS=Homo sapiens ... [more]
S23A2_XENTR2.357e-2935.96Solute carrier family 23 member 2 OS=Xenopus tropi... [more]
S23A2_MOUSE4.021e-2936.52Solute carrier family 23 member 2 OS=Mus musculus ... [more]
S23A2_RAT5.251e-2935.96Solute carrier family 23 member 2 OS=Rattus norveg... [more]
S23A1_MOUSE1.689e-2735.39Solute carrier family 23 member 1 OS=Mus musculus ... [more]
S23A1_RAT2.206e-2734.83Solute carrier family 23 member 1 OS=Rattus norveg... [more]
NAT12_ARATH9.270e-2632.81Nucleobase-ascorbate transporter 12 OS=Arabidopsis... [more]
NAT11_ARATH1.133e-2332.11Nucleobase-ascorbate transporter 11 OS=Arabidopsis... [more]
NAT9_ARATH1.809e-2134.27Putative nucleobase-ascorbate transporter 9 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00292 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00292 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623201 ID=BQ623201; Name=BQ623201; organism=Citrus sinensis; type=EST; length=538bp
TGCTTTTCTGCATTGGAGTTGTTTGGGCTTTTGCTGCCATCCTCACTGCA
GCTGGTGCTTACAATAATGTTCCAGAGCAAACTAAACTGAGCTGCCGCAC
AGATCGTTCTTATCTTTTGTCTTCTGCTCCTTGGATTAAGGTTCCTTACC
CATTTCAGTGGGGTACTCCCATATTCAGAGCAAGCCATGTCTTTGGGATG
ATAGGAGCAGCACTTGTAACATCTGCAGAGTCAACTGGAACATTTATTGC
AGCATCACGGTTTGCAGGTGCTACAGCTCCTCCAGCACATGTCCTCAGCC
GAAGTATTGGCCTGCAGGGTATTGGCATGCTGGTTGAAGGAATTTTTGGT
TCTCTTGTTGGTACTACTGCATCTGTGGAAAATGTTGGCCTCCTCGGCCT
AACACACATAGGCAGCAGAAGAGTGGTGCAGATTTCAACTGCGTTCATGA
TATTTTTCTCCATATTTGGGAAGTTTGGTGCCTTCTTTGCATCCATTCCA
TTGCCAATATTTGCTGCCATATACTGTGTTCTATTAGG
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