BQ623202

Overview
NameBQ623202
Unique NameBQ623202
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6855 contig Csv1_Contig6855:17..637. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.376e-32
Identity = 73/160 (45.62%), Postives = 103/160 (64.38%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV    +E TS +P  +LFK F+L  DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.797e-32
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV     E TS +P  +LFK F+L  DTL+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.003e-32
Identity = 76/162 (46.91%), Postives = 101/162 (62.35%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV    AE  S +P  +LFK F+L  D LLPKV P+ V +VE I G+GGPG+IKK  F EG+ +KY K RVD +D+ N  Y+++ IEG   GDA    ++ V  E K+V  PDGGS   +  KF+ K   EI  EQ+K   EK  G+ KA+E+Y LA+ +A
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDA----LEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1M_BETVE (Major pollen allergen Bet v 1-M/N OS=Betula verrucosa GN=BETV1M PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 6.828e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV    +E TS +P  +LFK F+L  D L+PKV PQ + +VE I G+GGPG+IKK  F EG+ +KY K RVD +D  N  Y+Y+ I  EG A   T++ +  E K+V TPDGGS   +  K++ K   E+K E +KA  EK + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILDGDNLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMI--EGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.917e-32
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 8.917e-32
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.165e-31
Identity = 73/162 (45.06%), Postives = 102/162 (62.96%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPNA 562
            MGV     E TS +P  +LFK F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  Y+Y+ IEG   GD    T++ +S E K+V TP+GGS   +  K++ K   E+K EQ+KA  E  + + +A+E+Y LA+ +A
Sbjct:    1 MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGD----TLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31
Identity = 66/159 (41.51%), Postives = 101/159 (63.52%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPN 559
            MGV     E TS + P +L+K  V   D L+PKV+   ++++E++ G+GG G+IKK  FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+E+K+   PDGGS + + +K++ K  A   EE++K G  +  G+FKALE Y LANP+
Sbjct:    1 MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31
Identity = 68/159 (42.77%), Postives = 103/159 (64.78%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALANPN 559
            MGV T   + TST+PP KLFK  V   D ++PKV+  + K VE++ G+GGPG++KK  FVEG    Y  H+V+A+D     YNY+ + G G ++I  ++ +S+E K+   P+GGS   +++K++ K  A+  E++V+ G  K   +FKA+EAY LANPN
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVVDSI-KTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDI--VEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.747e-30
Identity = 70/159 (44.03%), Postives = 98/159 (61.64%), Query Frame = 2
Query:   83 MGVLTLNAEETSTLPPEKLFKLFVLHFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYETKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKAGLEKEKGIFKALEAYALAN 553
            MGV    AE TS +P  +LFK F+L  + L+PKV PQ V +VE + G+GGPG+IKK  F EG+  KY K RV+ +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++K   E  + + +A+E+Y LA+
Sbjct:    1 MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAH 155          
The following BLAST results are available for this feature:
BLAST of BQ623202 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
BEV1K_BETVE1.376e-3245.63Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1B_BETVE1.797e-3245.63Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]
MPAG1_ALNGL4.003e-3246.91Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1M_BETVE6.828e-3245.00Major pollen allergen Bet v 1-M/N OS=Betula verruc... [more]
BEV1J_BETVE8.917e-3245.06Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1E_BETVE8.917e-3245.06Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1F_BETVE1.165e-3145.06Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
PR1_MEDSA1.987e-3141.51Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
ABR18_PEA1.987e-3142.77ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
MPAC2_CARBE3.747e-3044.03Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00293 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00293 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623202 ID=BQ623202; Name=BQ623202; organism=Citrus sinensis; type=EST; length=621bp
ATCACAATTCACTCAGAAAATTTCCCAATTTCAGTTGATCGATAGTTTTC
ATATTCTTTCTTTGTTTAACTCTTAGACAATCATGGGTGTTCTCACGTTG
AATGCAGAGGAAACAAGCACTCTCCCCCCTGAAAAGTTGTTCAAACTTTT
TGTCCTTCATTTCGACACCCTTCTGCCCAAAGTCCTGCCTCAGGTTGTAA
AGAACGTTGAATTGATTTCAGGGGATGGAGGCCCTGGAAGCATCAAGAAG
TTTAACTTTGTTGAAGGTGCTGATTGGAAGTACTTTAAGCATAGGGTTGA
TGCATTGGACAAAGAGAACAAGATATACAATTACACGGCAATTGAAGGTG
AGGGTGATGCTAACATCCCTACTATTGATCATGTTTCTTATGAGACTAAG
GTTGTGGGCACCCCTGACGGAGGAAGCAAGAGCACCGTTGTTATCAAGTT
CTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGGTTAAGGCAGGCT
TGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCCTATGCCTTGGCA
AACCCGAATGCCGTATAAGCTCTTACATCAACACTTCACCGCACTTGCGT
CGCCTTTGTTGCAACATTATG
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