BQ623251

Overview
NameBQ623251
Unique NameBQ623251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.587e-23
Identity = 58/169 (34.32%), Postives = 98/169 (57.99%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLA-PDGVTFLGLLYACSHSGM 541
            R +FD +    R + +W  +I  YSQNG A +AL +F  M   D  + P+  T                G+ IHAYV +  +      V   L++MY+++GD ++A+  F++L++++ ++WT ++ G   HG G++A   F +M+++G A PDG+T+LG+LYACSH G+
Sbjct:  271 RYLFDGMP--ERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVC-ALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434          

HSP 2 Score: 78.9518 bits (193), Expect = 1.681e-14
Identity = 50/162 (30.86%), Postives = 78/162 (48.15%), Query Frame = 2
Query:   74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYV----LRNQYEMLIPF---VANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            +V  W  +I  +  N   +DA+  F +M  Q   VK N                   G+  H ++        ++  + F   +A  LIDMY++ GD+ TAR +FD + +R +VSW S++TGY  +G  ++A   F  M   G+APD VTFL ++ A    G
Sbjct:  172 NVVAWGSLISGFVNNNRFSDAIEAFREM--QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQG 331          

HSP 3 Score: 72.4034 bits (176), Expect = 1.573e-12
Identity = 47/167 (28.14%), Postives = 84/167 (50.30%), Query Frame = 2
Query:   26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYAC 526
            L + R +F++I   +  V  W  MI  YS +   + AL  + +M +  K   P+ FT               FG  +H +V++  +E+ + +V+ CL+ MY   G+++    VF+++ Q NVV+W SL++G+  +     A  AF +M+  G+  +    + LL AC
Sbjct:   57 LSYARSVFESIDCPS--VYIWNSMIRGYSNSPNPDKALIFYQEMLR--KGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNM-YVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23
Identity = 58/167 (34.73%), Postives = 100/167 (59.88%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            R +FD +  ++RD ATW  MI +Y + G   +AL LF QM +Q   V+P+  +               +GRQ+HA+++R Q++  + +VA+ L+ MY + G++  A++VFD    ++++ W S+++GY  HGLG++A   F +M   G  P+ VT + +L ACS++G
Sbjct:  285 RRVFDLM--EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG--VRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV-YVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAG 446          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23
Identity = 59/168 (35.12%), Postives = 96/168 (57.14%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            + +FDA+  K+  + +W  +I  Y QNG  + AL +F QM      ++    +                GR+ HAY L++  E    F+A  LIDMY+++G I  +  VF+ LK+++  SW +++ GYG+HGL  +A   F++M++ G  PD +TFLG+L AC+HSG+
Sbjct:  551 QALFDAMEDKS--LVSWNTVITGYLQNGFPDRALGVFRQMVLYG--IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLED-DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713          

HSP 2 Score: 73.9442 bits (180), Expect = 5.406e-13
Identity = 41/155 (26.45%), Postives = 81/155 (52.26%), Query Frame = 2
Query:   65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            +++ V +W  +IG ++Q+     +L    QM     L  P++FT                G+++H +++RN  E  + FV   ++ +Y   G++ T + +FD ++ +++VSW +++TGY  +G  D+A   F QM   G+   G++ + +  ACS
Sbjct:  457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL--PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL-FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608          

HSP 3 Score: 68.9366 bits (167), Expect = 1.739e-11
Identity = 41/154 (26.62%), Postives = 70/154 (45.45%), Query Frame = 2
Query:   68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            N++V +W  M+G +S  G  +    +  QM    + VK +  T                 +++H Y L+ ++ +    VAN  +  Y++ G +  A+ VF  ++ + V SW +L+ G+        +  A  QM+  GL PD  T   LL ACS
Sbjct:  355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507          

HSP 4 Score: 68.1662 bits (165), Expect = 2.967e-11
Identity = 44/170 (25.88%), Postives = 80/170 (47.06%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQ--DKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK-----EGLAPDGVTFLGLLYACSH 532
            +FD +  +N  + +W  MI  +S NG + ++  L  +M ++  D    P+  T                G+ +H + ++ + +  +  + N L+DMYS+ G I  A+++F     +NVVSW +++ G+   G     H  FD +R+     E +  D VT L  +  C H
Sbjct:  244 LFDIMPERN--LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL-VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407          

HSP 5 Score: 66.6254 bits (161), Expect = 8.631e-11
Identity = 45/168 (26.79%), Postives = 77/168 (45.83%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE----GLAPDGVTFLGLLYACS 529
            R +FDA+  KN  +  W  +I SYS+N   ++ L  F +M     L+ P+ FT                G  +H  V++      + FV N L+  Y   G +  A  +FD + +RN+VSW S++  +  +G  +++     +M +E       PD  T + +L  C+
Sbjct:  140 RFVFDALRSKN--LFQWNAVISSYSRNELYDEVLETFIEMISTTDLL-PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV-FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.763e-23
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +D+  W  +I +Y QNG  N+AL +F ++ Q  K +K N  T                GR IH+Y+ ++   M    V + LI MYS+ GD++ +R VF+++++R+V  W++++ G  MHG G++A   F +M++  + P+GVTF  +  ACSH+G+
Sbjct:  327 KDIVAWNALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGL 481          

HSP 2 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 51/168 (30.36%), Postives = 81/168 (48.21%), Query Frame = 2
Query:   26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            L + R +FD I PK    A W  +I +Y+       ++  F  M  + +   PN +T                G+ +H   +++     + FVAN LI  Y   GD+D+A  VF  +K+++VVSW S++ G+   G  DKA   F +M  E +    VT +G+L AC+
Sbjct:   80 LEYARKVFDEI-PKPNSFA-WNTLIRAYASGPDPVLSIWAFLDMVSESQCY-PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV-FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243          

HSP 3 Score: 75.485 bits (184), Expect = 1.858e-13
Identity = 38/121 (31.40%), Postives = 69/121 (57.02%), Query Frame = 2
Query:   65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGM 427
            K +DV +W  MI  + Q G  + AL LF +M  +D  VK +  T               FGRQ+ +Y+  N+  + +  +AN ++DMY++ G I+ A+ +FD +++++ V+WT+++ GY +
Sbjct:  193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESED--VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLT-LANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAI 310          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 7.526e-23
Identity = 57/157 (36.31%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            RDV +W  M+ +Y+  G  N+ L +F +M   D   KP+ FT                G  +H Y+ ++  E +  F+A  L+DMYS+ G ID A  VF    +R+V +W S+++   +HGLG  A   F +M  EG  P+G+TF+G+L AC+H GM
Sbjct:  266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD-DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE-IEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM 420          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.284e-22
Identity = 56/158 (35.44%), Postives = 86/158 (54.43%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEML-IPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +DV +W  +IG Y+      +AL LF +M +  +   PN  T                GR IH Y+ +    +     +   LIDMY++ GDI+ A  VF+++  +++ SW +++ G+ MHG  D +   F +MRK G+ PD +TF+GLL ACSHSGM
Sbjct:  330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET--PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485          

HSP 2 Score: 95.9005 bits (237), Expect = 1.329e-19
Identity = 55/165 (33.33%), Postives = 88/165 (53.33%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            +FD I  K  DV +W  MI  Y++ G   +AL LF  M + +  V+P+  T                GRQ+H ++  + +   +  V N LID+YS+ G+++TA  +F+ L  ++V+SW +L+ GY    L  +A   F +M + G  P+ VT L +L AC+H G
Sbjct:  222 LFDEIPVK--DVVSWNAMISGYAETGNYKEALELFKDMMKTN--VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV-NALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 58/166 (34.94%), Postives = 94/166 (56.63%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +FD + PK RD  +W  MI  YSQ+G + +AL LF QM ++   +  ++F+                G+Q+H  +++  YE    FV N L+ MY + G I+ A  +F  +  +++VSW +++ GY  HG G+ A   F+ M++EGL PD  T + +L ACSH+G+
Sbjct:  365 LFDKM-PK-RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALE--LGKQLHGRLVKGGYETGC-FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.677e-22
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 2
Query:   68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            +R++  W  +I  Y+  G    AL LF QM  Q   +KP+AFT                G+QIH +V+R   ++   FV N LIDMYS+SG +D+A  VF+ +K R+VV+W S++ G+  +G   +A   FD M    L  + VTFL ++ ACS  G
Sbjct:  367 DRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR--IKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519          

HSP 2 Score: 99.3673 bits (246), Expect = 1.202e-20
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 2
Query:   65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            K+R V TW  M+  +SQNG + +A++LF  M+     ++ N  T                G+ +H  ++ +  + L  F    LIDMY++ GD++ A  VF  +  R++VSW+S++  YGMHG    A   F+QM + G  P+ V F+ +L AC HSG
Sbjct:  466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS--YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL--FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSG 619          

HSP 3 Score: 83.1889 bits (204), Expect = 8.911e-16
Identity = 45/157 (28.66%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            RD+  W+ ++ S  +NG    AL +F  M   D  V+P+A T                 R +H  + R  ++ L   + N L+ MYS+ GD+ ++  +F+ + ++N VSWT++++ Y      +KA  +F +M K G+ P+ VT   +L +C   G+
Sbjct:  165 RDLVAWSTLVSSCLENGEVVKALRMFKCMV--DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFD-LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318          

HSP 4 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 43/166 (25.90%), Postives = 79/166 (47.59%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +F+ IA KN    +WT MI SY++   +  AL  F +M +    ++PN  T                G+ +H + +R + +     ++  L+++Y+  G +     V   +  RN+V+W SL++ Y   G+  +A   F QM  + + PD  T    + AC ++G+
Sbjct:  259 IFEKIAKKN--AVSWTAMISSYNRGEFSEKALRSFSEMIKSG--IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.860e-22
Identity = 60/168 (35.71%), Postives = 95/168 (56.55%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            R +FD I  K+R   ++  ++  Y+Q+G +N+A  +F ++ + +K+V  NA T                G+ IH  V+R   E  +  V   +IDMY + G ++TAR  FD +K +NV SWT+++ GYGMHG   KA   F  M   G+ P+ +TF+ +L ACSH+G+
Sbjct:  240 RKIFDQIVDKDR--VSYNSIMSVYAQSGMSNEAFEVFRRLVK-NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV-IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403          

HSP 2 Score: 70.0922 bits (170), Expect = 7.807e-12
Identity = 49/174 (28.16%), Postives = 87/174 (50.00%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF----QQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGD--IDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAP-DGVTFLGLLYACSHSG 538
            R +FD I PK R++ +WT MI  Y  NG A DA++LF  +       D  +  ++                     IH++V++  ++  +  V N L+D Y++ G+  +  AR +FD +  ++ VS+ S+M+ Y   G+ ++A   F ++ K  +   + +T   +L A SHSG
Sbjct:  131 RKVFDEI-PK-RNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22
Identity = 50/157 (31.85%), Postives = 89/157 (56.69%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +D+ +WT MI  YSQN    +A+A+F +M ++   + P+  T                G+++H Y L+N + +L  ++ + L+DMYS+ G ++ A +VF NL ++N+  W S++ G   HG   +A   F +M  E + P+ VTF+ +  AC+H+G+
Sbjct:  250 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG--IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF-VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 403          
The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP214_ARATH2.587e-2334.32Putative pentatricopeptide repeat-containing prote... [more]
PPR84_ARATH5.763e-2334.73Pentatricopeptide repeat-containing protein At1g56... [more]
PPR48_ARATH5.763e-2335.12Pentatricopeptide repeat-containing protein At1g18... [more]
PP175_ARATH5.763e-2334.39Pentatricopeptide repeat-containing protein At2g29... [more]
PP321_ARATH7.526e-2336.31Pentatricopeptide repeat-containing protein At4g18... [more]
PPR21_ARATH1.284e-2235.44Pentatricopeptide repeat-containing protein At1g08... [more]
PP301_ARATH1.677e-2234.94Pentatricopeptide repeat-containing protein At4g02... [more]
PP111_ARATH1.677e-2237.58Putative pentatricopeptide repeat-containing prote... [more]
PP258_ARATH2.860e-2235.71Pentatricopeptide repeat-containing protein At3g26... [more]
PPR15_ARATH3.735e-2231.85Pentatricopeptide repeat-containing protein At1g06... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00342 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00342 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bp
GACATGTACGCTAAGTGCAAGAGTGTTGATGTGGCACCGTGTTATGTTTG
ATGCAATTGCACCAAAAAACAGGGATGTTGCAACTTGGACAGTAATGATA
GGTAGTTATTCTCAGAATGGAGGAGCCAATGATGCCCTGGCACTTTTTCC
TCAGATGTTCCAGCAAGATAAACTTGTAAAGCCAAATGCTTTTACTTTAT
CTTGTGCTCTTATGGCTTGTGCTCGTTTGGCTGCACTGAGATTTGGTAGA
CAAATTCATGCATATGTGCTGCGGAATCAATATGAGATGTTGATTCCGTT
TGTGGCCAATTGCCTGATAGATATGTATTCACGATCAGGAGACATTGACA
CAGCTAGAGTTGTATTTGATAACTTGAAGCAAAGAAATGTTGTTTCCTGG
ACATCCTTGATGACAGGTTATGGCATGCACGGTCTTGGCGACAAAGCTCA
CTGGGCTTTTGATCAGATGAGGAAAGAAGGTCTAGCACCTGATGGTGTAA
CCTTCCTTGGTCTGCTCTATGCTTGCAGCCACTCAGGAATGGGTGA
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