BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP359_ARATH (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +V TW MI SY + A+ALF +M ++ KP++ T G+ IH Y+ ++EM + A LIDMY++ G ++ +R +FD Q++ V W +++GYGMHG + A FDQM + + P G TFL LL AC+H+G+ Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSEN--FKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSA-ALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGL 649
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 59/167 (35.33%), Postives = 93/167 (55.69%), Query Frame = 2 Query: 41 VMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 V+FD +A KN V +W +I +Y QNG AL LF +++ D + P++ T GR+IHAY+++++Y + N L+ MY+ GD++ AR F+++ ++VVSW S++ Y +HG G + W F +M + P+ TF LL ACS SGM Sbjct: 386 VIFDRMAEKN--VISWNSIIAAYVQNGKNYSALELFQELW--DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY-WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGM 547 HSP 2 Score: 87.0409 bits (214), Expect = 6.171e-17 Identity = 50/157 (31.85%), Postives = 77/157 (49.04%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVA--NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 R++ W VMIG Y++NG DA F +M +Q+ L +P+ T GR IH Y +R + +P + LIDMY G + +A V+FD + ++NV+SW S++ Y +G A F ++ L PD T +L A + S Sbjct: 296 RNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL-QPDVITSINLLPASAILE----GRTIHGYAMRRGF---LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAES 444 HSP 3 Score: 78.5666 bits (192), Expect = 2.195e-14 Identity = 45/152 (29.61%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYA 523 RD+ +W MI Y G +L LF +M + KP+ F+ G++IH + +R++ E V ++DMYS+ G++ A +F+ + QRN+V+W ++ Y +G A F +M ++ GL PD +T + LL A Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG--FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343 HSP 4 Score: 70.4774 bits (171), Expect = 5.977e-12 Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 2 Query: 38 RVMFDAIA----PKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSH 532 R+M DA+ D W VMI ++ G +A+ + +M VK + FT G++IHA V++ + + +V N LI +Y + G A VF+ + +R++VSW S+++GY G G + F +M K G PD + + L ACSH Sbjct: 78 RLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAG--VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDV-YVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 51/156 (32.69%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +++ +WT +I + Q+G +A ++F +M +++++ + GRQ+H V+ ++ + F++N LIDMY++ D+ A+ +F ++ R+VVSWTSL+ G HG +KA +D M G+ P+ VTF+GL+YACSH G Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEM-RRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV-FISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVG 353
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV---------KPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 ++RD+ TW MI Y + DAL L +M ++ V KPN+ T G++IHAY ++N + V + L+DMY++ G + +R VFD + Q+NV++W ++ YGMHG G +A M +G+ P+ VTF+ + ACSHSGM Sbjct: 467 EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA-VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633 HSP 2 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 45/157 (28.66%), Postives = 72/157 (45.86%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSG 538 RD+ TW ++ S QN +AL +M + V+P+ FT G+++HAY L+N FV + L+DMY + + R VFD + R + W +++ GY + +A F M + GL + T G++ AC SG Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419 HSP 3 Score: 66.6254 bits (161), Expect = 8.631e-11 Identity = 49/175 (28.00%), Postives = 81/175 (46.29%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMR-----------KEGLAPDGVTFLGLLYACS 529 R +FD + +R + W MI YSQN +AL LF M + L+ N+ T IH +V++ + FV N L+DMYSR G ID A +F ++ R++V+W +++TGY + A +M+ + L P+ +T + +L +C+ Sbjct: 358 RRVFDGMF--DRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLA-NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR-DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.735e-22 Identity = 60/174 (34.48%), Postives = 98/174 (56.32%), Query Frame = 2 Query: 26 LMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIP--FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +M+ + MF + K+ + +W VMIG Y +N +A+ L+ +M +P+A + G++IH Y+ R + LIP + N LIDMY++ G ++ AR VF+N+K R+VVSWT++++ YG G G A F +++ GL PD + F+ L ACSH+G+ Sbjct: 259 VMYVKDMFFKMGKKS--LVSWNVMIGVYMKNAMPVEAVELYSRMEADG--FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK---LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGL 425 HSP 2 Score: 69.707 bits (169), Expect = 1.020e-11 Identity = 51/166 (30.72%), Postives = 77/166 (46.39%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 R +FD I +N V VMI SY NG + + +F M + V+P+ +T GR+IH + + FV N L+ MY + G + AR+V D + +R+VVSW SL+ GY + D A +M ++ D T LL A S++ Sbjct: 94 RKVFDEIPERN--VIIINVMIRSYVNNGFYGEGVKVFGTMCGCN--VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL-FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP427_ARATH (Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.074e-22 Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 2 Query: 62 PKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVAN-CLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 P+ VA W +I Y+ +G + +AL L M +D V + FT +Q HA ++RN +E I VAN L+D YS+ G +DTAR VFD L ++N++SW +LM GY HG G A F++M +AP+ VTFL +L AC++SG+ Sbjct: 286 PEKTTVA-WNNVIAGYALHGYSEEALCLLYDM--RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEI--VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441 HSP 2 Score: 22.3274 bits (46), Expect = 4.074e-22 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 1 Query: 1 DMYAKCKSVDVAPCYV*C 54 DMY+KC ++ A C C Sbjct: 267 DMYSKCGDIEDARCAFEC 284
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP244_ARATH (Pentatricopeptide repeat-containing protein At3g20730 OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22 Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQ-NGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 K RD+ + T +I +SQ N +DA +F M + K + GRQIH + L++ + N LIDMY++SG+I+ A + F+ +K+++V SWTSL+ GYG HG +KA +++M E + P+ VTFL LL ACSH+G Sbjct: 277 KKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK--TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTG 433 HSP 2 Score: 92.0485 bits (227), Expect = 1.918e-18 Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYA 523 R +FD I+ RDV +WT MI +S+ G DAL LF +M ++D VK N FT G QIH V + + V + L+ +Y+R G ++ AR+ FD++K+R++VSW +++ GY + D + F M EG PD TF LL A Sbjct: 68 RKLFDRIS--KRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED--VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNL-IVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 224
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP200_ARATH (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22 Identity = 58/165 (35.15%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +FD + +N +W MI + +NG DAL +F +M Q+K VKP+ FT GR IH Y++RN++E L V LIDMY + G I+ VF+ ++ + W S++ G +G ++A F ++ + GL PD V+F+G+L AC+HSG Sbjct: 214 LFDEMPQRNG--VSWNSMISGFVRNGRFKDALDMFREM--QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFE-LNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.879e-22 Identity = 56/163 (34.36%), Postives = 93/163 (57.06%), Query Frame = 2 Query: 56 IAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 ++ K+RDV WT MI Y Q+G +A+ LF M + +PN++T G+QIH +++ E+ V+N LI MY+++G+I +A FD ++ +R+ VSWTS++ HG ++A F+ M EGL PD +T++G+ AC+H+G+ Sbjct: 371 VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ--RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530 HSP 2 Score: 77.411 bits (189), Expect = 4.890e-14 Identity = 53/186 (28.49%), Postives = 81/186 (43.55%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV---------------------------------VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 RD+ TW MI ++Q G AL +F +M + D L+ P+ FT G+QIH++++ ++ + V N LI MYSR G ++TAR +F +LK R+VV+WT+++ GY HG +A F M G P+ T +L S Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLR-DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD-ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22 Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +V TWT +I + G +D+L F QM Q V N+ T GR+IH +V+R I V N L++MY++ G + +VF+ ++ ++++SW S++ GYGMHG +KA FD+M G PDG+ + +L ACSH+G+ Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQM--QFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENI-LVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL 550 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |