BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP189_ARATH (Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.372e-22 Identity = 53/162 (32.72%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 56 IAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +AP+ +++ TWT MI Y +NG AL F +M + V + F G+ IH ++ ++ +V N L+++Y++ GDI A F ++ +++VSW +++ +G+HGL D+A +D M G+ PD VTF+GLL CSHSG+ Sbjct: 296 LAPE-KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG--VDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA-YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGL 453
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.322e-22 Identity = 63/165 (38.18%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 47 FDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 FD+I P DVA WT MI +NG A +F QM L P+ FT GRQIHA L+ PFV L+DMY++ G ID A +F ++ N+ +W +++ G HG G + F QM+ G+ PD VTF+G+L ACSHSG+ Sbjct: 575 FDSI-PVPDDVA-WTTMISGCIENGEEERAFHVFSQMRLMGVL--PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN-DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734 HSP 2 Score: 80.4925 bits (197), Expect = 5.776e-15 Identity = 45/154 (29.22%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 N D+ W M+ Y+Q+ + L LF M +Q + + + FT G+Q+HAY +++ Y++ + +V++ ++DMY + GD+ A+ FD++ + V+WT++++G +G ++A F QMR G+ PD T L A S Sbjct: 479 NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE--RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL-WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629 HSP 3 Score: 67.0106 bits (162), Expect = 6.609e-11 Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 2 Query: 98 IGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 + Y +G + L F M + D V+ + T G+Q+H L+ ++++ V+N LI+MY + AR VFDN+ +R+++SW S++ G +GL +A F Q+ + GL PD T +L A S Sbjct: 287 LSEYLHSGQYSALLKCFADMVESD--VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT-VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 55/168 (32.74%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 RVMFD + ++V TWT++I Y++ G +A L QM +K +A G +IH+ + R+ +V N L+DMY++ G++ A VF+++ ++++VSW +++ G G+HG G +A F +MR+EG+ PD VTF+ +L +C+H+G+ Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG--LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNA-YVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 431
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 54/156 (34.62%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 D TW +I + + G L + QM + + V P+ T G++IH +LR YE + + N LI+MYS+ G ++ + VF+ + +R+VV+WT ++ YGM+G G+KA F M K G+ PD V F+ ++YACSHSG+ Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ-IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625 HSP 2 Score: 79.337 bits (194), Expect = 1.287e-14 Identity = 47/160 (29.38%), Postives = 84/160 (52.50%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYA 523 +F ++P ++V W +I ++S+NG +AL + ++ ++ V P+ +T G ++ +L +E + FV N L+DMYSR G + AR VFD + R++VSW SL++GY HG ++A + +++ + PD T +L A Sbjct: 61 VFRRVSPA-KNVYLWNSIIRAFSKNGLFPEALEFYGKL--RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL-FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPA 216
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.087e-21 Identity = 53/169 (31.36%), Postives = 96/169 (56.80%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSGM 541 R +FD + K+ + W ++ + QNG A++A+ +F QM ++ +P++ T G +H Y++ ++ + + LI++YSR GD+ AR VFD +K+ NV +WT++++ YG HG G +A F++M + G P+ VTF+ +L AC+H+G+ Sbjct: 162 RQVFDRMPEKS--IVAWNSLVSGFEQNGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVK-LGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGL 325 HSP 2 Score: 82.8037 bits (203), Expect = 1.164e-15 Identity = 51/179 (28.49%), Postives = 92/179 (51.40%), Query Frame = 2 Query: 2 TCTLSARVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 T SAR + + ++F ++ D + +I S S+ +A + +M + V P+ +T G+ +H + + + + L +V L+ YS+ GD++ AR VFD + ++++V+W SL++G+ +GL D+A F QMR+ G PD TF+ LL AC+ +G Sbjct: 49 TLACSARAIAYTHLLFLSVPLP--DDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSN--VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG-LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTG 222
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 60/166 (36.14%), Postives = 90/166 (54.22%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 MFD + RD+ +WT MI + + G +AL F +M Q VKP+ FG +H YVL ++ + V+N LID+Y R G ++ AR VF N+++R VVSW S++ G+ +G ++ F +M+++G PD VTF G L ACSH G+ Sbjct: 162 MFDKMP--ERDLISWTAMINGFVKKGYQEEALLWFREM--QISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR-VSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 1.419e-21 Identity = 55/167 (32.93%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 R +FD I V + MI Y++ N+AL+LF +M Q K +KPN T G+ IH Y ++ + + V LIDM+++ G +D A +F+ ++ ++ +W++++ Y HG +K+ F++MR E + PD +TFLGLL ACSH+G Sbjct: 184 RCVFDRIVEPC--VVCYNAMITGYARRNRPNEALSLFREM--QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK-VNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.854e-21 Identity = 57/160 (35.62%), Postives = 92/160 (57.50%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDI-DTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +++D+ TW +I S + +++AL +F Q F+ V PN +T G+Q+H + R + + +AN LIDMY++ G+I D+ RV + + +RN+VSWTS+M GYG HG G +A FD+M G+ PD + F+ +L AC H+G+ Sbjct: 275 EDKDLITWNTLI-SELERSDSSEALLMF-QRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE-LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.854e-21 Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 D+A W MI + N AL LF +M Q L PN + GRQ H V+++ Y + FV L DMY + G+ID+AR FD + ++N V W ++ GYG +G GD+A + +M G PDG+TF+ +L ACSHSG+ Sbjct: 482 DIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC-PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGY-VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGL 635
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.421e-21 Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R++FD + K +D+ W M Y Q +AL LF ++ Q +P+ FT G++ H +L+ E P++ N L+DMY++ G + A FD+ R+VV W S+++ Y HG G KA ++M EG+ P+ +TF+G+L ACSH+G+ Sbjct: 509 RLVFDEM--KVKDLVIWNSMFAGYVQQSENEEALNLFLEL--QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECN-PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671 HSP 2 Score: 84.7297 bits (208), Expect = 3.063e-16 Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 R++FDA+ K+ TWT MI + G + +L LF Q+ + + V P+ + G+QIHA++LR EM + N LID Y + G + A +F+ + +N++SWT+L++GY + L +A F M K GL PD +YACS Sbjct: 203 RLVFDALPEKS--TVTWTTMISGCVKMGRSYVSLQLFYQLMEDN--VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM-NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD-------MYACS 354 HSP 3 Score: 69.707 bits (169), Expect = 1.020e-11 Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 20 RVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWA---FDQMRKEGLAPDGVTFLGLLYA 523 RV+ H+ +F+ + KN + +WT ++ Y QN +A+ LF M + +KP+ + FG Q+HAY ++ +V N LIDMY++ + AR VFD +VV + +++ GY G + H A F MR + P +TF+ LL A Sbjct: 299 RVIAAHK-LFNGMPNKN--IISWTTLLSGYKQNALHKEAMELFTSMSKFG--LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN-DSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |