BQ623251

Overview
NameBQ623251
Unique NameBQ623251
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21
Identity = 60/159 (37.74%), Postives = 84/159 (52.83%), Query Frame = 2
Query:   65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            K +D   WT MI    +N   N AL LF +M  ++  V  N FT                GR +H++V  NQ   L  FV N LI+MYSR GDI+ AR VF  ++ ++V+S+ ++++G  MHG   +A   F  M   G  P+ VT + LL ACSH G+
Sbjct:  216 KIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN--VSANEFTAVCVLSACSDLGALELGRWVHSFV-ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21
Identity = 57/157 (36.31%), Postives = 85/157 (54.14%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQR-NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            + +  WT M+  +SQNG   +AL  + +M     L  P+  T                GR IH+ +    ++ L    +N LIDMY++ GD+  +  VFD +++R NVVSW SL+ GY  +G  + A   FD MR+  + PD +TFLG+L ACSH+G
Sbjct:  695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL--PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD-LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848          

HSP 2 Score: 81.2629 bits (199), Expect = 3.386e-15
Identity = 48/149 (32.21%), Postives = 71/149 (47.65%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLL 517
            +DV  W  M+  YS  G     L  F  +F+    + PN FT               FGRQIH  +++   E    +    L+DMY++   I  AR VF+ +   N V WT L +GY   GL ++A   F++MR EG  PD + F+ ++
Sbjct:  123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ--IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN-SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268          

HSP 3 Score: 71.2478 bits (173), Expect = 3.504e-12
Identity = 45/163 (27.61%), Postives = 77/163 (47.24%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSH 532
            +F+A+  KN DV  W  MI  Y+ NG ++  + LF  M      +  + FT                G Q H+ +++ +    + FV N L+DMY++ G ++ AR +F+ +  R+ V+W +++  Y       +A   F +M   G+  DG      L AC+H
Sbjct:  384 VFEALEEKN-DVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNI--DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL-FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21
Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = 2
Query:   47 FDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            FD +  + RDVA WT +I  Y QN    +AL L+ +M  +   + PN  T                G+Q+H + +++ + + +P + + L  MYS+ G ++   +VF     ++VVSW ++++G   +G GD+A   F++M  EG+ PD VTF+ ++ ACSH G
Sbjct:  380 FDCL--QERDVALWTSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP-IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKG 538          

HSP 2 Score: 95.5153 bits (236), Expect = 1.735e-19
Identity = 53/162 (32.72%), Postives = 91/162 (56.17%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            MFD+   +N    TW+ M+  YSQNG + +A+ LF +MF     +KP+ +T                G+Q+H+++L+  +E  + F    L+DMY+++G +  AR  FD L++R+V  WTSL++GY  +   ++A   + +M+  G+ P+  T   +L ACS
Sbjct:  278 MFDSSGDRNS--ITWSAMVTGYSQNGESLEAVKLFSRMFSAG--IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL-FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434          

HSP 3 Score: 78.9518 bits (193), Expect = 1.681e-14
Identity = 44/155 (28.39%), Postives = 77/155 (49.68%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVA--NCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            R+  TW+ M+  Y+  G   +A+ +F    ++ +    + +                 GRQIH   ++N    L+ FVA  N L+ MYS+   ++ A  +FD+   RN ++W++++TGY  +G   +A   F +M   G+ P   T +G+L ACS
Sbjct:  182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNG---LLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS 333          

HSP 4 Score: 70.0922 bits (170), Expect = 7.807e-12
Identity = 55/175 (31.43%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDA---LALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFD---QMRKEGLAPDGV--TFLGLLYACSHSGMG 544
            +F+AI  K  DV +W  +I  YSQNGG + +   + LF +M  QD L  PNA+T                GRQ HA V++      I +V   L+ MY ++G ++    VF  + +RN  +W+++++GY   G  ++A   F+   + ++EG   D V    L  L A  + G+G
Sbjct:   71 IFNAIICK--DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDIL--PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI-YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP115_ARATH (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21
Identity = 58/164 (35.37%), Postives = 89/164 (54.27%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            R +FD I    RD+  W  MI   + N    +AL LF  M  ++K+  PN+                  G+++HA+VL+++  +  PFV + LID+Y + GD+ + R VF   KQRN +SWT+LM+GY  +G  D+A  +   M++EG  PD VT   +L  C+
Sbjct:  269 RRVFDEIV--ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIY-PNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429          

HSP 2 Score: 82.8037 bits (203), Expect = 1.164e-15
Identity = 47/165 (28.48%), Postives = 82/165 (49.70%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538
            +FD +  + R+V  WT MI  Y +N      + +F  M       +P++ T                G+++H ++L+ ++E  IPFV+  +I MY + GD+ +A   FD +  +  ++WT+++  YG + L   A   F+QM   G  P+  TF  +L  CS +G
Sbjct:  475 LFDRL--EQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH--RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFES-IPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAG 634          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21
Identity = 52/158 (32.91%), Postives = 88/158 (55.70%), Query Frame = 2
Query:   68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +++V TW +MIG Y +N    +AL     M      +KPN F+                 + +H+ ++ +  E L   +++ L+D+Y++ GDI T+R VF ++K+ +V  W +++TG+  HGL  +A   F +M  E ++PD +TFLGLL  CSH G+
Sbjct:  126 DQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD-IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIE-LNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.394e-21
Identity = 48/159 (30.19%), Postives = 92/159 (57.86%), Query Frame = 2
Query:   68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXF-GRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            ++D+  W+ M+  Y+Q G    A+ +F ++ +    +KPN FT                 G+Q H + ++++ +  +  V++ L+ MY++ G+I++A  VF   +++++VSW S+++GY  HG   KA   F +M+K  +  DGVTF+G+  AC+H+G+
Sbjct:  456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG--IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSL-CVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611          

HSP 2 Score: 91.2781 bits (225), Expect = 3.272e-18
Identity = 52/165 (31.52%), Postives = 92/165 (55.76%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSH 532
            R +FD +  K R+V TWT +I  Y++N   ++ L LF +M  Q++  +PN+FT                G Q+H  V++N  +  IP V+N LI++Y + G++  AR++FD  + ++VV+W S+++GY  +GL  +A   F  MR   +     +F  ++  C++
Sbjct:  148 RKVFDEM--KERNVVTWTTLISGYARNSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP-VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307          

HSP 3 Score: 80.4925 bits (197), Expect = 5.776e-15
Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 2
Query:   74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            +V +WT MI  + QN G  +A+ LF +M  + K V+PN FT                  ++HA V++  YE     V   L+D Y + G ++ A  VF  +  +++V+W++++ GY   G  + A   F ++ K G+ P+  TF  +L  C+
Sbjct:  361 NVVSWTAMISGFLQNDGKEEAVDLFSEM--KRKGVRPNEFTYSVILTALPVISPS----EVHAQVVKTNYERSST-VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505          

HSP 4 Score: 71.2478 bits (173), Expect = 3.504e-12
Identity = 42/158 (26.58%), Postives = 77/158 (48.73%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGMG 544
            RD  ++  ++  +S++G   +A  LF  + +    +  + F+               FGRQ+H   ++  +   +  V   L+D Y +  +    R VFD +K+RNVV+WT+L++GY  + + D+    F +M+ EG  P+  TF   L   +  G+G
Sbjct:   56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDEL--FGRQLHCQCIKFGFLDDVS-VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21
Identity = 56/168 (33.33%), Postives = 93/168 (55.36%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            R +FD I  K  DV +WT MI  Y ++    +  +LF ++    +  +PN +T                G+Q+H Y+ R  ++    F ++ L+DMY++ G+I++A+ V D   + ++VSWTSL+ G   +G  D+A   FD + K G  PD VTF+ +L AC+H+G+
Sbjct:  273 RNIFDKIVEK--DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE--RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY-SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435          

HSP 2 Score: 73.1738 bits (178), Expect = 9.222e-13
Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 2
Query:   38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529
            R +FD +  K  D  +WT M+  Y +     +AL L+  M Q+    +PN FT                G++IH +++R   +     + + L+DMY + G ID AR +FD + +++VVSWTS++  Y       +    F ++      P+  TF G+L AC+
Sbjct:  171 RKLFDEMTEK--DSYSWTAMVTGYVKKDQPEEALVLYSLM-QRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDS-DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21
Identity = 54/157 (34.39%), Postives = 89/157 (56.69%), Query Frame = 2
Query:   71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            RD+ +W VMI  +S  G  N AL+++ +M  +   V  +++T                G  +H      + E  + FV+N LIDMY++ G ++ A  VF+ +++R+V++W S++ GYG+HG G +A   F +M   G+ P+ +TFLGLL  CSH G+
Sbjct:  171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEG--VCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV-FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGL 324          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP414_ARATH (Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E102 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.200e-21
Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = 2
Query:   59 APKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK--QRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLGLLYACSHSGM 541
            A   R V TW  +IG +SQ G   +A+  F  M ++  ++ PN  T                G+ IHA  ++   +    FV N LI  YS+ G+++ + + F+ L+  QRN+VSW S++ GY  +G G++A   F++M K+  L P+ VT LG+L+AC+H+G+
Sbjct:  184 AMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVI-PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGL 346          
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 9.200e-21
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 2
Query:   74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +V +WT +    S+NG   +AL +F +M  Q++ V PNA T                G+++H + LR    +   +VA  L+DMY +SGD+ +A  +F  +K +++ SW  ++ GY M G G++   AF  M + G+ PD +TF  +L  C +SG+
Sbjct:  360 NVVSWTAIFSGCSKNGNFRNALKVFIKM--QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL 512          

HSP 2 Score: 85.1149 bits (209), Expect = 2.345e-16
Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 2
Query:   74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQ--YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGL 514
            D+ TW  ++  Y+  G + DA+A+  +M  Q   +KP+  +                G+ IH Y+LRNQ  Y++   +V   LIDMY ++G +  AR+VFD +  +N+V+W SL++G     L   A     +M KEG+ PD +T+  L
Sbjct:  189 DIVTWNSLLSGYASKGLSKDAIAVLKRM--QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV---YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332          

HSP 3 Score: 77.0258 bits (188), Expect = 6.386e-14
Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 2
Query:   44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541
            +FD + PK  D+A W  ++    ++G    A+ LF +M  Q    K    T                GRQIH YVLR   E  +  + N LI MYSR+G ++ +R VF+++K RN+ SW S+++ Y   G  D A    D+M   GL PD VT+  LL   +  G+
Sbjct:   45 LFDEM-PKRDDLA-WNEIVMVNLRSGNWEKAVELFREM--QFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS-MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205          
The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP435_ARATH3.162e-2137.74Putative pentatricopeptide repeat-containing prote... [more]
PP220_ARATH3.162e-2136.31Pentatricopeptide repeat-containing protein At3g09... [more]
PP181_ARATH3.162e-2132.32Pentatricopeptide repeat-containing protein At2g33... [more]
PP115_ARATH3.162e-2135.37Pentatricopeptide repeat-containing protein At1g71... [more]
PP428_ARATH4.130e-2132.91Pentatricopeptide repeat-containing protein At5g50... [more]
PP172_ARATH5.394e-2130.19Pentatricopeptide repeat-containing protein At2g27... [more]
PP353_ARATH7.045e-2133.33Pentatricopeptide repeat-containing protein At4g37... [more]
PP284_ARATH7.045e-2134.39Pentatricopeptide repeat-containing protein At3g56... [more]
PP414_ARATH9.200e-2134.15Pentatricopeptide repeat-containing protein At5g42... [more]
PP297_ARATH9.200e-2132.69Pentatricopeptide repeat-containing protein At4g01... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00342 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00342 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bp
GACATGTACGCTAAGTGCAAGAGTGTTGATGTGGCACCGTGTTATGTTTG
ATGCAATTGCACCAAAAAACAGGGATGTTGCAACTTGGACAGTAATGATA
GGTAGTTATTCTCAGAATGGAGGAGCCAATGATGCCCTGGCACTTTTTCC
TCAGATGTTCCAGCAAGATAAACTTGTAAAGCCAAATGCTTTTACTTTAT
CTTGTGCTCTTATGGCTTGTGCTCGTTTGGCTGCACTGAGATTTGGTAGA
CAAATTCATGCATATGTGCTGCGGAATCAATATGAGATGTTGATTCCGTT
TGTGGCCAATTGCCTGATAGATATGTATTCACGATCAGGAGACATTGACA
CAGCTAGAGTTGTATTTGATAACTTGAAGCAAAGAAATGTTGTTTCCTGG
ACATCCTTGATGACAGGTTATGGCATGCACGGTCTTGGCGACAAAGCTCA
CTGGGCTTTTGATCAGATGAGGAAAGAAGGTCTAGCACCTGATGGTGTAA
CCTTCCTTGGTCTGCTCTATGCTTGCAGCCACTCAGGAATGGGTGA
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