BQ623251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.202e-20 Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R++FD + + R V +W MI YS NG DA+ +F +M + D ++PN T G +H Y + + + + LIDMYS+ G I+ A VF+ L + NV++W++++ G+ +HG A F +MR+ G+ P V ++ LL ACSH G+ Sbjct: 228 RMLFDKM--RQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD--IRPNYVTLVSVLPAISRLGSLELGEWLHLYA-EDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP313_ARATH (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.247e-20 Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 R +FD++ R+V +WT MI +Y+QN ++A+ LF + N F +G+ H V R YE VA L+DMY++ G + A +F ++ +V+S+TS++ HGLG+ A FD+M + P+ VT LG+L+ACSHSG+ Sbjct: 186 RRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT-VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGL 352 HSP 2 Score: 20.7866 bits (42), Expect = 1.247e-20 Identity = 7/12 (58.33%), Postives = 8/12 (66.67%), Query Frame = 1 Query: 1 DMYAKCKSVDVA 36 DMY KC V+ A Sbjct: 174 DMYGKCNDVETA 185 HSP 3 Score: 78.1814 bits (191), Expect = 2.867e-14 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNL--KQRNVVSWTSLMTGYGMHGLGDKA 448 R +FD + N V +WT +I Y+ G +AL++F +M +D+ V PN +T G+ IHA + + I V++ L+DMY + D++TAR VFD++ RNVVSWTS++T Y + G +A Sbjct: 84 RKLFDEMCEPN--VVSWTSVISGYNDMGKPQNALSMFQKM-HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNI-VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEA 218
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 54/164 (32.93%), Postives = 89/164 (54.27%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 +F+ + KN V +WT +I +SQ G A++ + +M + K +KPN +T G +IH Y+L N + L + L+DMY++ G++D A VF N+ ++++SWT+++ G+ +HG +A F QM G PD V FL +L AC +S Sbjct: 249 LFELMPEKN--VVSWTTLINGFSQTGDYETAISTYFEMLE--KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK-LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP343_ARATH (Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 55/168 (32.74%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 RV+F+ K RDV W+ MI Y++ G ++ + L QM ++ ++ N+ T F +H+ +L+ + I + N LIDMY++ G + AR VF L ++++VSW+S++ YG+HG G +A F M K G D + FL +L AC+H+G+ Sbjct: 318 RVLFET--SKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEG--IEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI-LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGL 480 HSP 2 Score: 67.0106 bits (162), Expect = 6.609e-11 Identity = 47/165 (28.48%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 44 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXX-FGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 +FD + KN +WT MI N + LF M +++ ++PN T ++IH + R+ A + MY R G++ +RV+F+ K R+VV W+S+++GY G + +QMRKEG+ + VT L ++ AC++S Sbjct: 218 VFDQMEVKNE--VSWTAMISGCVANQNYEMGVDLFRAMQREN--LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTA-AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS 377
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 55/168 (32.74%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 38 RVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +V+FD K D+ WT MI +Y ++ +AL +F +M +KP+ + + +H+ + N E + + N LI+MY++ G +D R VF+ + +RNVVSW+S++ MHG A F +M++E + P+ VTF+G+LY CSHSG+ Sbjct: 298 QVIFDQTEKK--DLVCWTTMISAYVESDYPQEALRVFEEMCCSG--IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS-INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGL 460
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.569e-20 Identity = 57/174 (32.76%), Postives = 93/174 (53.45%), Query Frame = 2 Query: 20 RVLMWHRVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM-RKEGLAPDGVTFLGLLYACSHSG 538 ++L R +FD I DV W V++ Y + G ++ L +F +M + ++P+ F+ G+ IH +V + ++ FV L+DMY++ G I+TA VF+ L +RNV SW +L+ GY +G KA D++ R++G+ PD V LG+L AC+H G Sbjct: 166 KLLFDARKVFDEIPQP--DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG--IEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 53/156 (33.97%), Postives = 90/156 (57.69%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 R+ +WT +I Y+++G A++A+ +F +M ++ V+P+ T G +I +YV + + N +IDMY++SG+I A VF+ + +RNVV+WT+++ G HG G +A F++M K G+ P+ VTF+ +L ACSH G Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN--VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS-LNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.050e-20 Identity = 57/158 (36.08%), Postives = 89/158 (56.33%), Query Frame = 2 Query: 71 RDVA-TWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +DVA +W VMI SY G A+ ++ QM VKP+ T G+QIH + ++ E + + L+DMYS+ G+ A +F+++ +++VVSWT +++ YG HG +A + FD+M+K GL PDGVT L +L AC H+G+ Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG--VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLET-DELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526 HSP 2 Score: 77.7962 bits (190), Expect = 3.744e-14 Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 2 Query: 71 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHS 535 RDVA+W +I + Q+G A AL LF +M + +PN+ + G++IH ++ +E L +V + L+DMY + ++ AR VF + ++++V+W S++ GY G ++M EG P T +L ACS S Sbjct: 171 RDVASWNTVISCFYQSGEAEKALELFGRM--ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE-LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322 HSP 3 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 42/152 (27.63%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 74 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACS 529 DV W ++ YS+N +D L +F ++ V P++FT GR IH V+++ Y + VA+ L+ MY++ + + VFD + +R+V SW ++++ + G +KA F +M G P+ V+ + ACS Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICV-PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDV-VVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 219
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSG 538 +++DV TWT MI + +NG A++A+ F +M + V N T FGR +H L F+ + L+DMY + D A+ VFD + RNVV+WT+L+ GY DK F++M K +AP+ T +L AC+H G Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVG 320 HSP 2 Score: 94.3597 bits (233), Expect = 3.865e-19 Identity = 49/158 (31.01%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 68 NRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 +R+V TWT +I Y Q+ + + +F +M + D V PN T GR++H Y+++N E+ LID+Y + G ++ A +VF+ L ++NV +WT+++ G+ HG A F M ++P+ VTF+ +L AC+H G+ Sbjct: 268 SRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD--VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTT-AGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.677e-20 Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = 2 Query: 65 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTXXXXXXXXXXXXXXXFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLGLLYACSHSGM 541 K RD+ W MI Y Q G + L ++ M +Q+++V P+ +T G++ HA +++ + I V + L+DMY + VFD L RNV++WTSL++GYG HG + F++M++EG P+ VTFL +L AC+H G+ Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIV-PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI-IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325 The following BLAST results are available for this feature:
BLAST of BQ623251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623251 ID=BQ623251; Name=BQ623251; organism=Citrus sinensis; type=EST; length=546bpback to top |