BQ623302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODE_MOUSE (Extracellular superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.855e-14 Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 301 GD GN V NG V SL GP+ ++GR+ VVH EDDLGKGG++ SL GNAG RLAC VVG Sbjct: 158 GDFGNFVVR-NGQLWRHRVGLTASLAGPHAILGRSVVVHAGEDDLGKGGNQASLQNGNAGRRLACCVVG 225 HSP 2 Score: 28.4906 bits (62), Expect = 9.855e-14 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60 D + GC STG H+NP + H Sbjct: 134 DLSQGCDSTGPHYNPMEVPH 153
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODE_RAT (Extracellular superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod3 PE=1 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 1.039e-12 Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 301 GD GN V +G + SL GP++++GRA VVH EDDLGKGG++ S+ GNAG RLAC VVG Sbjct: 151 GDFGNFVVR-DGRLWKHRMGLATSLAGPHSILGRAVVVHAGEDDLGKGGNQASVQNGNAGRRLACCVVG 218 HSP 2 Score: 28.1054 bits (61), Expect = 1.039e-12 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60 D + GC STG H+NP + H Sbjct: 127 DLSQGCESTGPHYNPLGVPH 146
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODE_RABIT (Extracellular superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD3 PE=2 SV=2) HSP 1 Score: 62.3882 bits (150), Expect = 3.837e-12 Identity = 30/46 (65.22%), Postives = 36/46 (78.26%), Query Frame = 2 Query: 164 SLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVG 301 SL GP+++VGRA VVH EDDLG+GG+ S+ GNAG RLAC VVG Sbjct: 170 SLAGPHSIVGRAVVVHAGEDDLGRGGNAASVENGNAGPRLACCVVG 215 HSP 2 Score: 29.261 bits (64), Expect = 3.837e-12 Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60 D + GC STGAH+NP + H Sbjct: 124 DLSQGCDSTGAHYNPLAVQH 143
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODE_HUMAN (Extracellular superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD3 PE=1 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 3.841e-12 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 304 GD GN +G SL GP+++VGRA VVH EDDLG+GG++ S+ GNAG RLAC VVG+ Sbjct: 144 GDFGNFAVR-DGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212 HSP 2 Score: 27.335 bits (59), Expect = 3.841e-12 Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60 D + GC STG H+NP + H Sbjct: 120 DLSQGCESTGPHYNPLAVPH 139
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLA 286 GDLGN VA+ I D ++L+GP +++GR V+HE DDLGKGG++ SL TGNAGGR+A Sbjct: 83 GDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139 The following BLAST results are available for this feature:
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623302 ID=BQ623302; Name=BQ623302; organism=Citrus sinensis; type=EST; length=459bpback to top |