BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 1
Query:  400 HYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            HYRGVR RPWGK+AAEIRDP K G+R+WLGT+++   AA AYD AAF++RG KA LNFP
Sbjct:  106 HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFP 164          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 47/76 (61.84%), Postives = 54/76 (71.05%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTP 630
            YRGVR RPWGK+AAEIRDP +  ARVWLGT+DT E AA AYD+AA   RG+KAKLNFP        +  R+ PP P
Sbjct:   77 YRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP--------EDVRILPPPP 143          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana GN=ERF4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 1
Query:  382 DQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            + AK + YRGVR RPWG+YAAEIRDP K   RVWLGT+DT E AA AYD AA + RG+KAK NFP  L
Sbjct:   18 NNAKEIRYRGVRKRPWGRYAAEIRDPGKK-TRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFL 84          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana GN=ERF15 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFK 603
            YRGVR RPWGK+AAEIRD  +NG RVWLGT+D  E AALAYD+AAF  +GS A LNFP  + R + K
Sbjct:   86 YRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLK 152          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.252e-18
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            YRGVR RPWGK+AAEIRD  +NG RVWLGT+++ E AALAYD+AAF MRGS A LNF
Sbjct:   82 YRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNF 138          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1
Query:  361 GLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSVAHQSPS 657
            G A +  ++ +   YRG+R RPWGK+AAEIRDP++ GAR+WLGT+ T E AA AYD AA  +RGSKAK+NFP    + N +   V       VA  +P+
Sbjct:  111 GDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPRE-GARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPN 208          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 44/62 (70.97%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLG 588
            YRGVR RPWGK+AAEIRDP K   RVWLGT++T E AA AYD AA   RGSKAKLNFP  +G
Sbjct:   61 YRGVRQRPWGKWAAEIRDPHK-ATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVG 121          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1
Query:  352 QTAGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            ++A  A +   + +   YRG+R RPWGK+AAEIRDP+K G+R WLGT+DT E AA AYD AA  +RG+KAK+NFP
Sbjct:  111 ESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRK-GSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP 184          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 43/58 (74.14%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR RPWGK+AAEIRDP K  ARVWLGT+D  E AA AYD+AA   RG+KAKLNFP
Sbjct:  185 YRGVRQRPWGKWAAEIRDPFK-AARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.756e-17
Identity = 49/110 (44.55%), Postives = 64/110 (58.18%), Query Frame = 1
Query:  331 LDMVTYHQTAGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL-LGRGNFKPGRVTPPTPLSVAHQSPS 657
            L  +T     G AA+   + +   +RG+R RPWGK+AAEIRDP+K G RVWLGT+++ E AA AYD  A  +RG KAK+NFP         + G  T   P S   Q P+
Sbjct:   96 LSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRK-GVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEAPTTAQKRRAGSTTAKAPKSSVEQKPT 204          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
EF107_ARATH1.461e-1869.49Ethylene-responsive transcription factor ERF107 OS... [more]
EF110_ARATH1.909e-1861.84Ethylene-responsive transcription factor ERF110 OS... [more]
ERF78_ARATH3.256e-1866.18Ethylene-responsive transcription factor 4 OS=Arab... [more]
ERF93_ARATH4.252e-1865.67Ethylene-responsive transcription factor 15 OS=Ara... [more]
ERF92_ARATH4.252e-1873.68Ethylene-responsive transcription factor 1B OS=Ara... [more]
RA212_ARATH5.553e-1848.48Ethylene-responsive transcription factor RAP2-12 O... [more]
RAP26_ARATH7.253e-1870.97Ethylene-responsive transcription factor RAP2-6 OS... [more]
RAP22_ARATH2.110e-1757.33Ethylene-responsive transcription factor RAP2-2 OS... [more]
ABR1_ARATH2.110e-1774.14Ethylene-responsive transcription factor ABR1 OS=A... [more]
ERF1_ORYSJ2.756e-1744.55Ethylene-responsive transcription factor 1 OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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