BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana GN=ERF8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 48/94 (51.06%), Postives = 59/94 (62.77%), Query Frame = 1
Query:  376 DRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSVAHQSPS 657
            + + AK + YRGVR RPWG+YAAEIRDP K   RVWLGT+DT + AA AYD AA + RG KAK NF  ++G         + PT  S    SP+
Sbjct:   22 ESNAAKEIRYRGVRKRPWGRYAAEIRDPVKK-TRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNFGVIVG---------SSPTQSSTVVDSPT 105          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 1
Query:  355 TAGLAARDR-DQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            T  LA  D  +++K V YRGVR RPWG+YAAEIRDP K   RVWLG+++T E AA AYD AA   RGSKA  NFP
Sbjct:   36 TKALAVNDGGEKSKEVRYRGVRRRPWGRYAAEIRDPVKK-KRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFP 109          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = 1
Query:  373 RDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            RD  + +   YRG+R RPWGK+AAEIRDP K G RVWLGT+ T + AA AYD AA ++RG KAKLNFP+
Sbjct:   40 RDGKRERKNLYRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR RPWGK+AAEIRDPK+   RVWLGT++T E AA AYD+AA   RG +AKLNFP
Sbjct:  136 YRGVRQRPWGKFAAEIRDPKR-ATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.019e-17
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  376 DRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            D D  +   +RGVR RPWG++AAEIRDP + G RVWLGTYDTPE AA+ YDKAA +++G  A  NFP
Sbjct:   89 DSDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFP 154          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RA210_ARATH (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16
Identity = 42/76 (55.26%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  358 AGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            A +A R RD+     Y+G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A+LNFP LL
Sbjct:   19 AAVATRKRDKP----YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELL 89          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF08_ARATH (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana GN=ERF008 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 1
Query:  355 TAGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            T G+  R RD   +  Y+G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A+LNFP LL
Sbjct:   15 TMGIGTRKRD---LKPYKGIRMRKWGKWVAEIREPNKR-SRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELL 87          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPL 633
            YRGVR R WGK+ AEIR P+ N  R+WLGT+DT E AALAYDKAA+++RG  A+LNFP+L   G+   G      PL
Sbjct:  152 YRGVRQRHWGKWVAEIRLPR-NRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGEYKPL 227          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  379 RDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGS-KAKLNF 573
            R   K   YRGVR RPWGK+AAEIRD  +NG RVWLGT+ T E AA+AYDKAA  +RG+ KA  NF
Sbjct:  102 RVSCKTRKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNF 167          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana GN=ERF3 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  391 KVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            K + +RGVR RPWG++AAEIRDP K  ARVWLGT+D+ E AA AYD AA  +RG KAK NFP
Sbjct:   24 KEIRFRGVRKRPWGRFAAEIRDPWKK-ARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFP 84          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ERF79_ARATH3.599e-1751.06Ethylene-responsive transcription factor 8 OS=Arab... [more]
ERF77_ARATH4.701e-1761.33Ethylene-responsive transcription factor 10 OS=Ara... [more]
ERF71_ARATH4.701e-1762.32Ethylene-responsive transcription factor ERF071 OS... [more]
EF109_ARATH6.140e-1770.69Ethylene-responsive transcription factor ERF109 OS... [more]
PTI6_SOLLC8.019e-1761.19Pathogenesis-related genes transcriptional activat... [more]
RA210_ARATH1.368e-1655.26Ethylene-responsive transcription factor RAP2-10 O... [more]
ERF08_ARATH1.786e-1654.55Ethylene-responsive transcription factor ERF008 OS... [more]
RAP24_ARATH3.047e-1657.14Ethylene-responsive transcription factor RAP2-4 OS... [more]
ERF91_ARATH3.047e-1663.64Ethylene-responsive transcription factor ERF091 OS... [more]
ERF82_ARATH3.047e-1666.13Ethylene-responsive transcription factor 3 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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