BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 42/79 (53.16%), Postives = 50/79 (63.29%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSV 639
            YRGVR RPWGK+AAEIRDP     R+WLGT+ T E AA+AYD+AA  ++G KA  NF             +TPPTP  V
Sbjct:  105 YRGVRQRPWGKFAAEIRDPSSR-TRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNF-------------LTPPTPTPV 169          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana GN=ERF7 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 1
Query:  391 KVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            K   YRGVR RPWG++AAEIRDP K  +RVWLGT+D+   AA AYD AA  +RG KAK NFP
Sbjct:   23 KEPRYRGVRKRPWGRFAAEIRDPLKK-SRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFP 83          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR R WGK+ AEIR P+   AR+WLGT+DT E AA+AYD+ AF++RG  A LNFP
Sbjct:  143 YRGVRQRQWGKWVAEIRKPRSR-ARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFP 199          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1
Query:  373 RDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTP----PTPLSVAHQSPS 657
            R RD  K   YRGVR R WGK+ +EIR+P+K  +R+WLGT+ TPE AA A+D AA  ++G+ A LNFP L      +P  ++P       L  AH  P+
Sbjct:   41 RGRDSGKHPVYRGVRMRNWGKWVSEIREPRKK-SRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFP-RPVSLSPRDIQTAALKAAHMEPT 137          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 39/73 (53.42%), Postives = 50/73 (68.49%), Query Frame = 1
Query:  355 TAGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            T+  + + +D      + GVR RPWG+YAAEIRDP     R WLGT+DT E AALAYD+AA  MRG++A+ NF
Sbjct:    4 TSSKSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF 75          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR R WGK+ AEIR PK N  R+WLGT+DT E AA+AYD AA+++RG  A+LNFP
Sbjct:   93 YRGVRQRHWGKWVAEIRLPK-NRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 1
Query:  388 AKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            +    YRGVR RPWG+YAAEIRDP     R WLGT+DT E AA AYD AA   RG+KA+ NF +
Sbjct:   52 SSTTRYRGVRRRPWGRYAAEIRDPMSKERR-WLGTFDTAEQAACAYDSAARAFRGAKARTNFTY 114          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            ++G+R R WGK+ AEIR+P K  +R+WLG+Y TPE AA AYD A F +RG  A LNFP LL
Sbjct:   21 FKGIRMRKWGKWVAEIREPNKR-SRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELL 80          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 39/59 (66.10%), Postives = 43/59 (72.88%), Query Frame = 1
Query:  397 VHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            + YRGVR RPWG+YAAEIRDP     R WLGT+DT E AA AYD AA  MRG KA+ NF
Sbjct:   56 IRYRGVRRRPWGRYAAEIRDPLSKERR-WLGTFDTAEEAACAYDCAARAMRGLKARTNF 113          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2F_ARATH (Dehydration-responsive element-binding protein 2F OS=Arabidopsis thaliana GN=DREB2F PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  385 QAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL 582
            Q  +  YRGVR R WGK+ AEIR+PKK  AR+WLG++ T E AA+AYD+AA ++ G  A LN PHL
Sbjct:   22 QNALCQYRGVRQRTWGKWVAEIREPKKR-ARLWLGSFATAEEAAMAYDEAALKLYGHDAYLNLPHL 86          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
CRF6_ARATH3.369e-1553.16Ethylene-responsive transcription factor CRF6 OS=A... [more]
ERF83_ARATH4.400e-1564.52Ethylene-responsive transcription factor 7 OS=Arab... [more]
ERF54_ARATH9.802e-1563.79Ethylene-responsive transcription factor ERF054 OS... [more]
DREB3_ARATH9.802e-1545.45Dehydration-responsive element-binding protein 3 O... [more]
LEP_ARATH1.672e-1453.42Ethylene-responsive transcription factor LEP OS=Ar... [more]
ERF60_ARATH1.672e-1465.52Ethylene-responsive transcription factor ERF060 OS... [more]
ESR1_ARATH2.184e-1459.38Ethylene-responsive transcription factor ESR1 OS=A... [more]
ERF11_ARATH2.184e-1459.02Ethylene-responsive transcription factor ERF011 OS... [more]
ESR2_ARATH2.852e-1466.10Ethylene-responsive transcription factor ESR2 OS=A... [more]
DRE2F_ARATH2.852e-1457.58Dehydration-responsive element-binding protein 2F ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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