BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana GN=DREB2B PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLG 588
            +RGVR R WGK+ AEIR+PK  G R+WLGT+ T E AA AYD+AA  M GS A+LNFP  +G
Sbjct:   78 FRGVRQRIWGKWVAEIREPKI-GTRLWLGTFPTAEKAASAYDEAATAMYGSLARLNFPQSVG 138          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF34_ARATH (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana GN=ERF034 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLG 588
            YRGVR R WGK+ +EIR+P+K  +R+WLGTY T E AA A+D AA  ++G+ A LNFP L G
Sbjct:  100 YRGVRMRSWGKWVSEIREPRKK-SRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAG 160          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2D_ARATH (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana GN=DREB2D PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 42/83 (50.60%), Postives = 52/83 (62.65%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSVAHQS 651
            Y+GVR R WGK+ AEIR+P + GAR+WLGT+DT   AALAYD AA ++ G +A LN P  L        R  P T  S A Q+
Sbjct:   42 YKGVRQRTWGKWVAEIREPNR-GARLWLGTFDTSREAALAYDSAARKLYGPEAHLNLPESL--------RSYPKTASSPASQT 115          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF15_ARATH (Ethylene-responsive transcription factor ERF015 OS=Arabidopsis thaliana GN=ERF015 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            YRGVR R WGK+ +EIR PK  G R+WLG+YD PE AA AYD A F +RG K   NFP
Sbjct:   27 YRGVRKRSWGKWVSEIRVPK-TGRRIWLGSYDAPEKAARAYDAALFCIRGEKGVYNFP 83          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            YRGVR RPWGK+AAEIRDP++   R+WLGT+ T E AA+ YD AA ++RG  A  NF
Sbjct:  117 YRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF 172          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  397 VHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL-LGRGNFKPGRVTP 621
            + Y GVR RPWG+YAAEIR+P     R WLGT+DT E AALAYD+AA  +RG  A+ NF +  + RG+     V+P
Sbjct:   37 IKYVGVRRRPWGRYAAEIRNPTTK-ERYWLGTFDTAEEAALAYDRAARSIRGLTARTNFVYSDMPRGSSVTSFVSP 111          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF35_ARATH (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana GN=ERF035 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 1
Query:  382 DQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLG 588
            D      YRGVR R WGK+ +EIR+P+K  +R+WLGTY T E AA A+D AA  ++G+   LNFP L G
Sbjct:   64 DNKNPTSYRGVRMRSWGKWVSEIREPRKK-SRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSG 131          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  391 KVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            ++  +RGVR RPWGK+AAEIRDP++   R+WLGT++T E AA+ YD AA  +RG  A  NF
Sbjct:  121 QIKKFRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNF 180          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            Y GVR R WGK+ +EIR+P+K  +R+WLG++  PE AA AYD AAF ++G KA+LNFP
Sbjct:   45 YHGVRKRRWGKWVSEIREPRKK-SRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFP 101          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF22_ARATH (Ethylene-responsive transcription factor ERF022 OS=Arabidopsis thaliana GN=ERF022 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 34/61 (55.74%), Postives = 43/61 (70.49%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLL 585
            YRG+R R WGK+ +EIR+P K   R+WLG+Y+T E AA AYD AA  +RG    LNFP L+
Sbjct:   20 YRGIRRRKWGKWVSEIREPGKK-TRIWLGSYETAEMAAAAYDAAALHLRGRGTNLNFPELV 79          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
DRE2B_ARATH1.849e-1361.29Dehydration-responsive element-binding protein 2B ... [more]
ERF34_ARATH2.414e-1358.06Ethylene-responsive transcription factor ERF034 OS... [more]
DRE2D_ARATH2.414e-1350.60Dehydration-responsive element-binding protein 2D ... [more]
ERF15_ARATH3.153e-1362.07Ethylene-responsive transcription factor ERF015 OS... [more]
CRF4_ARATH3.153e-1361.40Ethylene-responsive transcription factor CRF4 OS=A... [more]
ERF87_ARATH4.118e-1352.63Ethylene-responsive transcription factor ERF087 OS... [more]
ERF35_ARATH4.118e-1352.17Ethylene-responsive transcription factor ERF035 OS... [more]
CRF3_ARATH4.118e-1355.74Ethylene-responsive transcription factor CRF3 OS=A... [more]
ERF23_ARATH5.379e-1358.62Ethylene-responsive transcription factor ERF023 OS... [more]
ERF22_ARATH5.379e-1355.74Ethylene-responsive transcription factor ERF022 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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