BQ623351

Overview
NameBQ623351
Unique NameBQ623351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10453 contig Csv1_Contig10453:309..1015. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            Y+G+R R WGK+ AEIR+P K  +R+WLG+Y T   AA AYD A F +RG  A+LNFP
Sbjct:   36 YKGIRMRKWGKWVAEIREPNKR-SRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFP 92          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 41/85 (48.24%), Postives = 52/85 (61.18%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFKPGRVTPPTPLSVAHQSPS 657
            YRGVR R WGK+ AEIR+P+K   R WLGT+ T E AA AYD+AA  + GS+A+LN              +TP +P SV+  S S
Sbjct:   55 YRGVRQRSWGKWVAEIREPRKR-TRKWLGTFATAEDAARAYDRAAVYLYGSRAQLN--------------LTPSSPSSVSSSSSS 124          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2C_ARATH (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana GN=DREB2C PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 1
Query:  394 VVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGN 597
            +  YRGVR R WGK+ AEIR+P   GAR+WLGT+ +   AALAYD+AA  + G  A+LN P +  R +
Sbjct:   69 ICDYRGVRQRRWGKWVAEIREPD-GGARLWLGTFSSSYEAALAYDEAAKAIYGQSARLNLPEITNRSS 135          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL 582
            YRG R R WGK+ +EIR+P+K  +R+WLGT+ T E AA A+D AA  ++GS A LNFP L
Sbjct:   26 YRGARMRSWGKWVSEIREPRKK-SRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPEL 84          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 1
Query:  373 RDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            + R+ A    Y+GVR R WGK+ +EIR P     R+WLG+YDTPE AA A+D A F +RG  A  NFP+
Sbjct:   11 KKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSR-ERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPN 78          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF17_ARATH (Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana GN=ERF017 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFP 576
            Y+GVR R WGK+ +EIR P     R+WLG+YDTPE AA A+D A + +RG+ AK NFP
Sbjct:   12 YKGVRKRKWGKWVSEIRLPNSR-ERIWLGSYDTPEKAARAFDAALYCLRGNNAKFNFP 68          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2E_ARATH (Dehydration-responsive element-binding protein 2E OS=Arabidopsis thaliana GN=DREB2E PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 1
Query:  394 VVHYRGVRTRPWGKYAAEIRDP-------KKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHLLGRGNFK 603
            V  +RGVR R WGK+ AEIR+P            R+WLGT+ T   AALAYD+AA  M G  A+LNFP  LG G  K
Sbjct:   67 VCRFRGVRQRVWGKWVAEIREPVSHRGANSSRSKRLWLGTFATAAEAALAYDRAASVMYGPYARLNFPEDLGGGRKK 143          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF69_ARATH (Ethylene-responsive transcription factor ERF069 OS=Arabidopsis thaliana GN=ERF069 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  358 AGLAARDRDQAKVVHYRGVRTRPWGKYAAEIRDPKKNGA--RVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNF 573
            A L A     A    +RGVR RPWGK+AAEIR  +  G   R+WLGT++T E AALAYD AA ++ G  A  NF
Sbjct:   60 ASLLAARNTTANKKKFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPH 579
            +RGVR R WGK+ AEIR+P + G R+WLGT++T   AA+AYD+AA ++ G +AKLN  H
Sbjct:   34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLNLVH 91          
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 1
Query:  403 YRGVRTRPWGKYAAEIRDPKKNGARVWLGTYDTPEGAALAYDKAAFEMRGSKAKLNFPHL 582
            YRGVR R WGK+ +EIR+P+K  +R+WLGT+ T E A  A+D AA  ++G+ A LNFP L
Sbjct:   19 YRGVRMRSWGKWVSEIREPRKK-SRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPEL 77          
The following BLAST results are available for this feature:
BLAST of BQ623351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
RAP29_ARATH9.175e-1356.90Ethylene-responsive transcription factor RAP2-9 OS... [more]
ABI4_ARATH1.198e-1248.24Ethylene-responsive transcription factor ABI4 OS=A... [more]
DRE2C_ARATH1.565e-1251.47Dehydration-responsive element-binding protein 2C ... [more]
ERF42_ARATH2.044e-1256.67Ethylene-responsive transcription factor ERF042 OS... [more]
ERF18_ARATH2.669e-1250.72Ethylene-responsive transcription factor ERF018 OS... [more]
ERF17_ARATH2.669e-1256.90Ethylene-responsive transcription factor ERF017 OS... [more]
DRE2E_ARATH2.669e-1250.65Dehydration-responsive element-binding protein 2E ... [more]
ERF69_ARATH4.553e-1251.35Ethylene-responsive transcription factor ERF069 OS... [more]
DRE2G_ARATH4.553e-1255.93Dehydration-responsive element-binding protein 2G ... [more]
ERF43_ARATH5.947e-1255.00Ethylene-responsive transcription factor ERF043 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00442 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00442 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623351 ID=BQ623351; Name=BQ623351; organism=Citrus sinensis; type=EST; length=706bp
TTTTCAGAATCGGATTTTGATCTTCTTCAAAATCTTCTCGAGGACGTAAA
CACAGCCTCATCTTTTGAATCGGATTACTTAAACAATGCACCCTCCGTGT
ACTCACCAACTTCGAGCTTCGGCAGTGCCGTCTTTGATTTTCCACTACAA
GTAACAGGTAATGTTGTTATTAACAATAACAACAACTACCCAATCCCTTC
CTATGGCTGCTATGATCATCCCAAAGCCTTAAACGACGCCGTTGACAGCG
TGGGTTGGATTTCCTTTGATCATCATCAAGCTGATCAGGATGATCAAGCA
ATAAGCGAAGCCGCCGCAGCCGCCGCTACCCTTGATATGGTGACTTACCA
CCAGACGGCGGGGTTGGCAGCACGTGATCGTGATCAGGCGAAGGTGGTGC
ATTACAGGGGGGTGAGGACGAGGCCATGGGGGAAATATGCGGCTGAGATT
AGAGACCCTAAGAAGAACGGGGCACGTGTTTGGCTTGGCACTTATGATAC
CCCTGAGGGCGCAGCCTTGGCTTATGATAAAGCCGCGTTCGAGATGCGTG
GCTCTAAAGCTAAGCTTAATTTTCCTCACTTACTTGGCAGGGGTAATTTT
AAGCCCGGTCGTGTCACACCACCAACACCACTAAGCGTGGCTCACCAGAG
TCCGAGCCTGAGCTTTCTCCTACTTCTTCATCTTCTTCCTCTTCTTCGGC
TACTTC
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