BQ623355

Overview
NameBQ623355
Unique NameBQ623355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:525..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60
Identity = 108/144 (75.00%), Postives = 124/144 (86.11%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGAICG G+VK FQ+  Y   GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+++ AW D WIFWVGPFIGAA+AA YHQ I+RA   K+
Sbjct:  147 LGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.560e-60
Identity = 107/144 (74.31%), Postives = 125/144 (86.81%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGA+CG G+VK FQ+  Y   GGGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+++ AW+D WIFWVGPFIGAA+AA YHQ I+RA   K+
Sbjct:  144 LGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.941e-59
Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRA 418
            LGAICG G+VK F    Y R GGGAN +  GY+ G GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY+ E AW+D WIFWVGP IGAA+AA YHQ I+RA
Sbjct:  142 LGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.118e-58
Identity = 105/144 (72.92%), Postives = 121/144 (84.03%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGAICG G+VK FQ+  Y   GGGAN +  GY+ G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++Y++  AW D WIFWVGPFIGAA+AA YH  ++RA   K+
Sbjct:  143 LGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRAIPFKS 286          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.906e-58
Identity = 105/144 (72.92%), Postives = 122/144 (84.72%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGAICG G+VK FQ+  Y   GGGAN +  GY+ G GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++Y++  AW+D WIFWVGPFIGAA+AA YH  I+RA   K+
Sbjct:  143 LGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRALPFKS 286          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 3.252e-58
Identity = 106/152 (69.74%), Postives = 123/152 (80.92%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 457
            LGAI G G+VK   K  Y   GGGAN ++DGYS    LGAEI+GTF+LVYTVFSATDPKR ARDS +PVL PLPIGFAVF+VHLATIP+TGTGINPARSLGAAV+Y++  AW D WIFWVGP IGA +AA YH+ +LR  A+KAL SF+S+S
Sbjct:  136 LGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKALSSFRSTS 287          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 3.044e-56
Identity = 102/145 (70.34%), Postives = 123/145 (84.83%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQ-KSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGAICG G+VK F+ K  +    GGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA++++K+  W+D WIFWVGPFIGAA+AA YHQ ++RA   K+
Sbjct:  144 LGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 288          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.044e-56
Identity = 102/144 (70.83%), Postives = 116/144 (80.56%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGA+CG G+VKAF  + Y   GGGAN ++ GY+ G GLGAE++GTFVLVYTVFSATD KR ARDSHVP LAPLPIGFAVF+VHLATIP+TGTGINPARSLGAA+IY     W   WIFWVGPF GAA+AA YHQ +LRA   K+
Sbjct:  149 LGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRAIPFKS 292          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.975e-56
Identity = 104/144 (72.22%), Postives = 119/144 (82.64%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKA 433
            LGAICG G+VK FQ+  Y   GG  N +A GY+ G GLGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ +TGTGINPARSLGAAVIY++  AW D WIFWVGPFIGAA+AA YHQ I+RA   K+
Sbjct:  142 LGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 285          
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.372e-53
Identity = 102/150 (68.00%), Postives = 116/150 (77.33%), Query Frame = 2
Query:    2 LGAICGCGLVKAFQKS-YYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVI--YSKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGS 442
            +GA+CG GL +A      Y R+GGGANELA GYS G G+ AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIP+TGTGINPARSLG A++      KAW   WIFWVGPF GAA A  YH +ILR +A+KA  S
Sbjct:  123 VGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFAS 272          
The following BLAST results are available for this feature:
BLAST of BQ623355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 134
Match NameE-valueIdentityDescription
PIP13_MAIZE1.560e-6075.00Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE1.560e-6074.31Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP1_SOLLC2.941e-5977.70Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP13_ORYSJ1.118e-5872.92Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP15_MAIZE1.906e-5872.92Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP27_ORYSJ3.252e-5869.74Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP2_PEA3.044e-5670.34Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP16_MAIZE3.044e-5670.83Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP11_MAIZE3.975e-5672.22Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP28_ORYSJ5.372e-5368.00Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00446 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00446 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623355 ID=BQ623355; Name=BQ623355; organism=Citrus sinensis; type=EST; length=619bp
TTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAGTCTT
ACTACACGAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTACAGC
ACTGGCACTGGATTGGGTGCTGAGATCATCGGTACCTTTGTTCTTGTCTA
CACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCACG
TTCCCGTCTTGGCGCCATTGCCAATTGGATTTGCTGTGTTCATGGTTCAC
TTGGCTACGATCCCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTT
GGGAGCTGCAGTGATTTACAGCAAGGAGAAGGCTTGGGATGATCAATGGA
TCTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCAC
CAATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAG
CTCCTCCAACATTTAATTAACTTTTAAAATAATTACTGGAGGATTAATCA
ATGGCTGTCAAGCGGCTTCGCGACTATGGAATTTGTACATTGTTTTATTT
GCATCAGTATTTAGTATAGCTGGTGTAGATCCCGCAGCACTTTGTGTGTG
TCTTTTGTTTACCTGAGGA
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